Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23a06
         (641 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0062 - 818396-818538,819482-819693,819936-820420,820540-82...    28   7.2  
06_01_0078 - 628946-629524,629620-629684,629814-629935,630042-63...    27   9.6  

>10_01_0062 -
           818396-818538,819482-819693,819936-820420,820540-820696,
           820787-820924,821127-821703,821978-822018,822679-822809
          Length = 627

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 202 SIWFIILILTLVTCTHLSMGGVMPRNLRNSGFNPYR 309
           +I  I+LI TLVT   L +GG+  +N +N    P R
Sbjct: 387 TICVIVLIWTLVTFPLLVLGGIAGKNSKNEFQAPCR 422


>06_01_0078 -
           628946-629524,629620-629684,629814-629935,630042-630129,
           630508-630819,630908-632189,632296-632784
          Length = 978

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 204 NLVHHSHTYISHMHPFVYGGCYAKKLEELR 293
           N V  SHTY++ +  +  G CY+K  E ++
Sbjct: 816 NHVPDSHTYLALIRAYTEGKCYSKAEEAIQ 845


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,392,903
Number of Sequences: 37544
Number of extensions: 290083
Number of successful extensions: 575
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)