BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23a04
(651 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 27 0.68
AY341224-1|AAR13788.1| 287|Anopheles gambiae TOLL9 protein. 23 8.4
AY341223-1|AAR13787.1| 287|Anopheles gambiae TOLL9 protein. 23 8.4
AY341222-1|AAR13786.1| 287|Anopheles gambiae TOLL9 protein. 23 8.4
AY341221-1|AAR13785.1| 287|Anopheles gambiae TOLL9 protein. 23 8.4
AY341220-1|AAR13784.1| 287|Anopheles gambiae TOLL9 protein. 23 8.4
AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein. 23 8.4
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 26.6 bits (56), Expect = 0.68
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = +2
Query: 449 ENSALSTRNLYTTK----SECADVRQKQIDTNDTIDLLLKENKNMSNELENLANFIELCY 616
EN+ R L K E + QK I DTI +L ++KN + ANF Y
Sbjct: 1037 ENAVEIARRLQRPKPQWDEEDLEDEQKAIGRRDTIHRILYQHKNKQDWSNLEANFKRNYY 1096
Query: 617 KE 622
KE
Sbjct: 1097 KE 1098
>AY341224-1|AAR13788.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.0 bits (47), Expect = 8.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 40 IFELVVTFRGLLKITFVSLLYYEF*ISYF 126
++ LV L +T V L YY F I YF
Sbjct: 145 VYILVSVAVSFLILTGVGLFYYWFHIKYF 173
>AY341223-1|AAR13787.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.0 bits (47), Expect = 8.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 40 IFELVVTFRGLLKITFVSLLYYEF*ISYF 126
++ LV L +T V L YY F I YF
Sbjct: 145 VYILVSVAVSFLILTGVGLFYYWFHIKYF 173
>AY341222-1|AAR13786.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.0 bits (47), Expect = 8.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 40 IFELVVTFRGLLKITFVSLLYYEF*ISYF 126
++ LV L +T V L YY F I YF
Sbjct: 145 VYILVSVAVSFLILTGVGLFYYWFHIKYF 173
>AY341221-1|AAR13785.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.0 bits (47), Expect = 8.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 40 IFELVVTFRGLLKITFVSLLYYEF*ISYF 126
++ LV L +T V L YY F I YF
Sbjct: 145 VYILVSVAVSFLILTGVGLFYYWFHIKYF 173
>AY341220-1|AAR13784.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 23.0 bits (47), Expect = 8.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 40 IFELVVTFRGLLKITFVSLLYYEF*ISYF 126
++ LV L +T V L YY F I YF
Sbjct: 145 VYILVSVAVSFLILTGVGLFYYWFHIKYF 173
>AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein.
Length = 576
Score = 23.0 bits (47), Expect = 8.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 40 IFELVVTFRGLLKITFVSLLYYEF*ISYF 126
++ LV L +T V L YY F I YF
Sbjct: 372 VYILVSVAVSFLILTGVGLFYYWFHIKYF 400
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,060
Number of Sequences: 2352
Number of extensions: 10025
Number of successful extensions: 79
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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