Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23a03
         (395 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   0.73 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   3.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   9.0  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 0.73
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = -1

Query: 302 LNTGSKRSFKITIDIQQYGGDRIRNNFPVY-FNIRVRNSTNQAHDSF 165
           LNT +  SF   I   Q     I NN+PV+ F        N  +D +
Sbjct: 564 LNTAATLSFCEMIHNAQVNKRSIHNNYPVHTFGRLTSKHDNSLYDEY 610


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +2

Query: 38  QSDIFTIEARLRSGIPAT-TAMKLD 109
           ++ +F    R R+GIPAT T + LD
Sbjct: 76  RNKLFVTVPRWRNGIPATLTYISLD 100


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 80  IPATTAMKLDCHGLK 124
           +PA + M  DC GL+
Sbjct: 275 VPAVSGMVFDCGGLE 289


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 117 PWQSNFMAVVAGIPLLSLASIVKISDC 37
           P  S+ +     I LL +  I KISDC
Sbjct: 400 PESSSNLQEKTKIDLLEIPPIRKISDC 426


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 88  SGNPTPE 68
           SGNPTPE
Sbjct: 418 SGNPTPE 424


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,378
Number of Sequences: 438
Number of extensions: 2340
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)