Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22p18
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical pr...    95   4e-20
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr...    32   0.25 
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ...    32   0.25 
U41993-4|AAA83446.4|  574|Caenorhabditis elegans Hypothetical pr...    30   1.0  
U88169-12|AAB42231.1|  419|Caenorhabditis elegans Hypothetical p...    30   1.4  
AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical ...    29   2.4  
AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical ...    29   2.4  
U80955-10|AAN65297.2|  475|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AF047659-5|AAC04429.1|  347|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z92806-4|CAB07259.1|  727|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical
           protein R05G6.7 protein.
          Length = 283

 Score = 94.7 bits (225), Expect = 4e-20
 Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
 Frame = +3

Query: 318 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESG--VEFTSGITSNQESGKVFGSLS 491
           MAPP +ADLGK A D+F+KGY+FG  K+D  T++     VEF S  + N  SGK+ G+L 
Sbjct: 1   MAPPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLD 60

Query: 492 SKFAVKDYGLTFTEKWNTDNTLATDITI 575
            K+ +  YG+T TEKWNT+N L T I +
Sbjct: 61  VKYKIPQYGITLTEKWNTENQLGTVIEV 88


>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
            T08A11.1 protein.
          Length = 1872

 Score = 32.3 bits (70), Expect = 0.25
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 411  TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 566
            T+S  G         + +S    G+ S K+ V  +G T  EKWN D  + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094


>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
            protein T08A11.1 protein.
          Length = 1872

 Score = 32.3 bits (70), Expect = 0.25
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 411  TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 566
            T+S  G         + +S    G+ S K+ V  +G T  EKWN D  + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094


>U41993-4|AAA83446.4|  574|Caenorhabditis elegans Hypothetical
           protein F44A2.3 protein.
          Length = 574

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 60  KIMLNFDDILIFFNINQLRKLYDRLPFVDAAVTQETIS 173
           KI L+ +D++ FFNI +L  +   L  +DAA T    S
Sbjct: 285 KISLSREDVINFFNIERLSHILIDLTLLDAASTSSDFS 322


>U88169-12|AAB42231.1|  419|Caenorhabditis elegans Hypothetical
           protein T03F1.1 protein.
          Length = 419

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/77 (20%), Positives = 35/77 (45%)
 Frame = +3

Query: 57  LKIMLNFDDILIFFNINQLRKLYDRLPFVDAAVTQETISCLRPDGTIGQMIICKDEDGEI 236
           LK +LNF ++  +   N L   + R          ++  CL+      + +  +  D E+
Sbjct: 280 LKYLLNFGEVSQYVGYNALSDFFPRDSIKPNPYCDDS-HCLQRQKEYEEKVANQPVDLEV 338

Query: 237 QCPNNETIQSQENKFSL 287
           + P  ET+  ++N++ +
Sbjct: 339 EVPEEETVVHEDNEWGI 355


>AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1b protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 429 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 569
           +E   G+ S  E+ K+F   +S+  ++ + LTF  +W   + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229


>AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1a protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 429 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 569
           +E   G+ S  E+ K+F   +S+  ++ + LTF  +W   + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229


>U80955-10|AAN65297.2|  475|Caenorhabditis elegans Hypothetical
           protein T04C9.1c protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 246 NNETIQSQENKFSLWRWLRNFHNDMA--PPYYAD-LGKKANDVFSKGYHFGVFKLDLKTK 416
           +++T+ +   KF++   LR+FH   A  P +  D    + +D+   G+ F    +D+  +
Sbjct: 26  HHQTMGASPRKFNITDGLRSFHKASAFLPGFVVDNCNAQLDDI---GFEFVQQCIDILEE 82

Query: 417 S---ESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTF-TEKWNT 545
           S   E GV    G+TS  +   + G L  + A +  GL    ++W T
Sbjct: 83  SGIHEQGVYRNCGVTSKVQKMMMLG-LDRRKASEKGGLNLRDDEWET 128


>Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical
           protein F57G4.1 protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 474 VFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 569
           VFG LSS     DYG+T   K+ TD      I
Sbjct: 252 VFGELSSSKKTIDYGITKQWKYRTDGRFELSI 283


>Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical
           protein K09C8.4 protein.
          Length = 633

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
 Frame = +3

Query: 267 QENKFSLWRWLRNFHN--------DMAPPYYADLGKKAN-DVFSKGYHFGVFKLDLKTKS 419
           Q N F LW+  RNF+N        +++  Y    GKK+      +G++ G+   DL    
Sbjct: 140 QTNIFDLWKQFRNFNNSQVFGMVENLSDWYLNKDGKKSVWPALGRGFNTGIIMFDLDKLR 199

Query: 420 ESG 428
           ++G
Sbjct: 200 KNG 202


>AF047659-5|AAC04429.1|  347|Caenorhabditis elegans Hypothetical
           protein K07H8.8 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +3

Query: 96  FNINQLRKLYDRLPFVDAAVTQETISCLRPD--GTIGQMIICKDEDGEIQCPNNETIQSQ 269
           FN   +   YD L     +   +   CL P    TIG   IC  +D E    NN TI ++
Sbjct: 94  FNQTFVPPFYDYLQDFTISPRYDISLCLIPKVVSTIGTAAICYIQDPEAFTKNNRTISTE 153


>Z92806-4|CAB07259.1|  727|Caenorhabditis elegans Hypothetical
           protein K10G4.4 protein.
          Length = 727

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 222 EDGEIQCPNNETIQSQENKFSLWRWLRNFHNDM 320
           E GEI  PN E   +  N+  L  WL N    +
Sbjct: 657 ESGEISAPNREDDPNNSNETILPYWLNNLETHL 689


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,392,241
Number of Sequences: 27780
Number of extensions: 284337
Number of successful extensions: 865
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)