Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22p16
         (735 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21321-2|AAG00050.1|  489|Caenorhabditis elegans Cytochrome p450...    30   1.5  
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel...    29   4.5  
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell...    29   4.5  
U58757-4|AAC47922.3|  580|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>U21321-2|AAG00050.1|  489|Caenorhabditis elegans Cytochrome p450
           family protein 44A1 protein.
          Length = 489

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +1

Query: 499 LFDEYGPVVRFISPVGNDIVL-INHPDHIQKVYTIEGDCPVRSTLDSLENTVLNTENHIY 675
           ++ +YG +V+     G   V+ I  P  +Q V   +G  P    L          +  + 
Sbjct: 69  MYKKYGKIVKENLGFGRKYVVHIFDPADVQTVLAADGKTPFIVPLQETTQKYREMKG-MN 127

Query: 676 GGLYTLNGEEWSRQRSII 729
            GL  LNG EW R RS +
Sbjct: 128 PGLGNLNGPEWYRLRSSV 145


>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-related
            protein LIN-59 protein.
          Length = 1312

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -3

Query: 457  FLC*LQMSVYQQSVECRYPINTDALSTNTSMISDLVHRQKVTR 329
            FLC +Q+   Q+  E   P N   ++TN+ + ++  H +KV R
Sbjct: 1206 FLCEMQIGKTQRVFEKVPPKNRYPINTNSYVFTEFTHPKKVVR 1248


>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
            lineage protein 59 protein.
          Length = 1312

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -3

Query: 457  FLC*LQMSVYQQSVECRYPINTDALSTNTSMISDLVHRQKVTR 329
            FLC +Q+   Q+  E   P N   ++TN+ + ++  H +KV R
Sbjct: 1206 FLCEMQIGKTQRVFEKVPPKNRYPINTNSYVFTEFTHPKKVVR 1248


>U58757-4|AAC47922.3|  580|Caenorhabditis elegans Hypothetical
           protein C01B10.4 protein.
          Length = 580

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 380 DKYFNDFGPGTSSKGNTTDSLLVNIIGITLAVGNI 276
           +KY ND   G  ++GN TD     I+ + L + N+
Sbjct: 361 EKYRNDVESGVENRGNHTDKTQGIILPLKLQINNL 395


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,458,134
Number of Sequences: 27780
Number of extensions: 348967
Number of successful extensions: 1044
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)