Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22p16
(735 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 26 0.32
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 1.3
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 24 1.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 24 1.3
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 2.3
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 23 2.3
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 3.9
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 3.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.2
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 6.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 6.9
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.1
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 9.1
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.32
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 414 STDCWYTDIWSQH 452
+T+CW T IW+ H
Sbjct: 53 TTNCWVTQIWTDH 65
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +1
Query: 442 GVNIGTFIN--SRKPLKKFSALFDEYGPVVRFISPVGNDIVLINHPDHIQKVYTIEGDC 612
G N+G + S K L++ D R + ++++NHP I YT DC
Sbjct: 305 GDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDC 363
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +1
Query: 442 GVNIGTFIN--SRKPLKKFSALFDEYGPVVRFISPVGNDIVLINHPDHIQKVYTIEGDC 612
G N+G + S K L++ D R + ++++NHP I YT DC
Sbjct: 16 GDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDC 74
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 332 CYLLTMYQVRNH*SICRQCVS 394
C+ T YQ+R+H + QC+S
Sbjct: 609 CFNCTQYQIRDHKDV-TQCIS 628
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 23.4 bits (48), Expect = 2.3
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = +2
Query: 491 FPLYSMSTVLWYAL*AQWVMTLY 559
FPLY +ST++++ + ++ +Y
Sbjct: 210 FPLYELSTIIFFLIPMLIILVVY 232
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 553 IVLINHPDHIQKVYTIEGDC 612
++++NHP I YT DC
Sbjct: 344 VIVLNHPGQISNGYTPVLDC 363
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = -2
Query: 323 SLLVNIIGITLAVGNISLVFLFSTGKA 243
+++ +++ I VGN ++++FST K+
Sbjct: 61 AIIYSMLLIMSLVGNCCVIWIFSTSKS 87
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = -2
Query: 323 SLLVNIIGITLAVGNISLVFLFSTGKA 243
+++ +++ I VGN ++++FST K+
Sbjct: 61 AIIYSMLLIMSLVGNCCVIWIFSTSKS 87
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 672 DMIFCVQYGIFQGIQC*PDRAITFYRVHFL 583
+ I C+Q F+ I+ PDR + ++ F+
Sbjct: 53 EAIQCLQSSAFKEIKTLPDRGMWSSKIEFI 82
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 340 FDD-VPGPKSLKYLSTVRQYLSDIGTQ 417
FD+ +P P +L Y RQ+ D+ TQ
Sbjct: 316 FDEFLPPPPNLDYHDYSRQFPRDLTTQ 342
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 6.9
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 666 IFCVQYGIFQGIQC*PDRAITFYRVHFL 583
I C+Q F+ I+ PDR + ++ F+
Sbjct: 2 IQCLQSSAFKEIKTLPDRGMWSSKIEFI 29
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -1
Query: 303 WNNSCCWKYFVGIFVFNRQSTD 238
WN + YF +F++NR + +
Sbjct: 661 WNFTIPNMYFKDVFIYNRPNEE 682
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -1
Query: 303 WNNSCCWKYFVGIFVFNRQSTD 238
WN + YF +F++NR + +
Sbjct: 661 WNFTIPNMYFKDVFIYNRPNEE 682
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,093
Number of Sequences: 438
Number of extensions: 4323
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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