Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22p13
         (646 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase D...    30   6.1  
AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase ...    30   6.1  
AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens ...    30   6.1  
AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase D...    30   6.1  

>AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase DNA
           binding protein 5 protein.
          Length = 1954

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
 Frame = +2

Query: 389 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 568
           E  NE+  S E   G E  +D   +  V   K   P+K+K ++K +  R + +   +++ 
Sbjct: 18  EMENEDEMSEEEDGGLEAFDDFFPVEPVSLPKKKKPKKLK-ENKCKGKRKKKEGSNDELS 76

Query: 569 RIQDD-EETEEYSSKHVRPN 625
             ++D EE  E       PN
Sbjct: 77  ENEEDLEEKSESEGSDYSPN 96


>AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase DNA
           binding protein 5 protein.
          Length = 1954

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
 Frame = +2

Query: 389 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 568
           E  NE+  S E   G E  +D   +  V   K   P+K+K ++K +  R + +   +++ 
Sbjct: 18  EMENEDEMSEEEDGGLEAFDDFFPVEPVSLPKKKKPKKLK-ENKCKGKRKKKEGSNDELS 76

Query: 569 RIQDD-EETEEYSSKHVRPN 625
             ++D EE  E       PN
Sbjct: 77  ENEEDLEEKSESEGSDYSPN 96


>AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45103 fis, clone BRAWH3032571, moderately
           similar to Chromodomain helicase-DNA-binding protein 4.
           ).
          Length = 1225

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
 Frame = +2

Query: 389 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 568
           E  NE+  S E   G E  +D   +  V   K   P+K+K ++K +  R + +   +++ 
Sbjct: 18  EMENEDEMSEEEDGGLEAFDDFFPVEPVSLPKKKKPKKLK-ENKCKGKRKKKEGSNDELS 76

Query: 569 RIQDD-EETEEYSSKHVRPN 625
             ++D EE  E       PN
Sbjct: 77  ENEEDLEEKSESEGSDYSPN 96


>AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase DNA
           binding protein 5 protein.
          Length = 1954

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
 Frame = +2

Query: 389 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 568
           E  NE+  S E   G E  +D   +  V   K   P+K+K ++K +  R + +   +++ 
Sbjct: 18  EMENEDEMSEEEDGGLEAFDDFFPVEPVSLPKKKKPKKLK-ENKCKGKRKKKEGSNDELS 76

Query: 569 RIQDD-EETEEYSSKHVRPN 625
             ++D EE  E       PN
Sbjct: 77  ENEEDLEEKSESEGSDYSPN 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,694,228
Number of Sequences: 237096
Number of extensions: 1388523
Number of successful extensions: 2772
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2766
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)