Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22p13
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 30 1.6
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 30 1.6
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 30 1.6
U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein. 30 1.6
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 2.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 2.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 2.1
Z99942-3|CAB17071.2| 585|Caenorhabditis elegans Hypothetical pr... 29 2.8
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 28 4.9
AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical... 28 4.9
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 28 6.5
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 28 6.5
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 395 RNEESASIENKSGS-EDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLR 571
++ +S+ EN G +D+ D+ S N + K + K D+K+ + V E +
Sbjct: 82 KSGDSSCFENGKGFFKDVQDAPSKPNNNPKKSKSEKSKKKDEKMTIKDYERKLVLEKGGQ 141
Query: 572 IQDDEETEEYSSKHVR 619
I + +E EY+ R
Sbjct: 142 IDESDEEAEYNKTQQR 157
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 422 NKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEY 601
NKSG ++ + ++ K + + +D + LS IR +S ED+ DDEE E
Sbjct: 6711 NKSGEGSVSSLAEFERLE--KEMTENQSPPEDVMMLSDIREESEAEDMSIRDDDEEDAEG 6768
Query: 602 SSKHVR 619
S ++
Sbjct: 6769 SDTELK 6774
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 422 NKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEY 601
NKSG ++ + ++ K + + +D + LS IR +S ED+ DDEE E
Sbjct: 6711 NKSGEGSVSSLAEFERLE--KEMTENQSPPEDVMMLSDIREESEAEDMSIRDDDEEDAEG 6768
Query: 602 SSKHVR 619
S ++
Sbjct: 6769 SDTELK 6774
>U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein.
Length = 869
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 422 NKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEY 601
NKSG ++ + ++ K + + +D + LS IR +S ED+ DDEE E
Sbjct: 586 NKSGEGSVSSLAEFERLE--KEMTENQSPPEDVMMLSDIREESEAEDMSIRDDDEEDAEG 643
Query: 602 SSKHVR 619
S ++
Sbjct: 644 SDTELK 649
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 389 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDK 520
++++ E+ASIE + E + S VD K + QK++ + K
Sbjct: 9925 KKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETK 9968
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +2
Query: 413 SIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDD--E 586
+IE +E++ S + + D + + +++KL+D E+ I + ED LRI + E
Sbjct: 10378 NIELLHNNENLRTRSDVTDFDDSISIRMKRLKLEDSGEIKIIGKNDSSEDQLRIPINVIE 10437
Query: 587 ETEEYSSKHV-RPNTQTVTI 643
T + +S V +TVT+
Sbjct: 10438 VTSKPTSLQVTSTERETVTL 10457
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 389 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDK 520
++++ E+ASIE + E + S VD K + QK++ + K
Sbjct: 9945 KKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETK 9988
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +2
Query: 413 SIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDD--E 586
+IE +E++ S + + D + + +++KL+D E+ I + ED LRI + E
Sbjct: 10398 NIELLHNNENLRTRSDVTDFDDSISIRMKRLKLEDSGEIKIIGKNDSSEDQLRIPINVIE 10457
Query: 587 ETEEYSSKHV-RPNTQTVTI 643
T + +S V +TVT+
Sbjct: 10458 VTSKPTSLQVTSTERETVTL 10477
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 389 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDK 520
++++ E+ASIE + E + S VD K + QK++ + K
Sbjct: 9945 KKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETK 9988
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +2
Query: 413 SIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDD--E 586
+IE +E++ S + + D + + +++KL+D E+ I + ED LRI + E
Sbjct: 10398 NIELLHNNENLRTRSDVTDFDDSISIRMKRLKLEDSGEIKIIGKNDSSEDQLRIPINVIE 10457
Query: 587 ETEEYSSKHV-RPNTQTVTI 643
T + +S V +TVT+
Sbjct: 10458 VTSKPTSLQVTSTERETVTL 10477
>Z99942-3|CAB17071.2| 585|Caenorhabditis elegans Hypothetical
protein H13N06.6 protein.
Length = 585
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 525 NFHESEPIPSKKTCYAFKMMKKPKSTLQNMFDPIR 629
N + +PIP+ +T Y + K P T+ NM+ +R
Sbjct: 192 NSNSPDPIPNVETTYKCIIRKMPFDTVNNMYHVVR 226
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 467 NVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEET 592
NVDGT+ +++++++L+LS R E + + D+E T
Sbjct: 543 NVDGTQKKLDMELEIEEELDLSGYRGHGKLEHEIALPDEEPT 584
>AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical
protein Y71A12B.11 protein.
Length = 286
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 389 ERRNEESASIENKS-GSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDV 565
E +E + E++S G ++ D + GT + + LDD + ++S E
Sbjct: 120 ESESESESEDESESEGFDESEDEEEVPKETGTYAFESKPEALDDSESEASDVSESKDESE 179
Query: 566 LRIQDDEETEEY 601
DD E EEY
Sbjct: 180 SEGSDDSEDEEY 191
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 534 ESEPIPSKKTCYAFKMMKKPKSTLQNMFDPIRKPL 638
ESEP P+KKT + K +K+P+ + P P+
Sbjct: 755 ESEPEPAKKTKRSLKKVKEPEPEPEEYEQPTPVPV 789
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 534 ESEPIPSKKTCYAFKMMKKPKSTLQNMFDPIRKPL 638
ESEP P+KKT + K +K+P+ + P P+
Sbjct: 753 ESEPEPAKKTKRSLKKVKEPEPEPEEYEQPTPVPV 787
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 534 ESEPIPSKKTCYAFKMMKKPKSTLQNMFDPIRKPL 638
ESEP P+KKT + K +K+P+ + P P+
Sbjct: 755 ESEPEPAKKTKRSLKKVKEPEPEPEEYEQPTPVPV 789
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 534 ESEPIPSKKTCYAFKMMKKPKSTLQNMFDPIRKPL 638
ESEP P+KKT + K +K+P+ + P P+
Sbjct: 753 ESEPEPAKKTKRSLKKVKEPEPEPEEYEQPTPVPV 787
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,034,586
Number of Sequences: 27780
Number of extensions: 253656
Number of successful extensions: 861
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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