Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22p10
         (491 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47073-1|CAA87371.3|  931|Caenorhabditis elegans Hypothetical pr...    33   0.11 
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr...    27   5.6  
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase...    27   5.6  
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi...    27   5.6  

>Z47073-1|CAA87371.3|  931|Caenorhabditis elegans Hypothetical
           protein ZC506.1 protein.
          Length = 931

 Score = 33.1 bits (72), Expect = 0.11
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +1

Query: 220 FVYHSYFVVSITMPIYFKHIKKELNKGI-KYVPLP*IHAVLCLLNFNYPPSRNEMALLAD 396
           FV  +YF+   T   ++ H+ K++   I KYV +P   A L  +       + E  +L++
Sbjct: 381 FVESTYFLYRATKDPHYLHVAKQIMDSINKYVKVPCGFAALKDIRTMVKEDQMESFVLSE 440

Query: 397 QLKYIYL 417
             KY+Y+
Sbjct: 441 TFKYLYM 447


>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
           protein ZK1067.1 protein.
          Length = 1323

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 309 ILNSFI*LFFYMLKIYWHCNRYNK 238
           +L  F  +F ++L +YW C R  K
Sbjct: 825 VLFGFAVMFLFILLVYWRCQRIGK 848


>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
           protein.
          Length = 1323

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 309 ILNSFI*LFFYMLKIYWHCNRYNK 238
           +L  F  +F ++L +YW C R  K
Sbjct: 825 VLFGFAVMFLFILLVYWRCQRIGK 848


>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
           kinase protein.
          Length = 1374

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 309 ILNSFI*LFFYMLKIYWHCNRYNK 238
           +L  F  +F ++L +YW C R  K
Sbjct: 876 VLFGFAVMFLFILLVYWRCQRIGK 899


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,689,237
Number of Sequences: 27780
Number of extensions: 184660
Number of successful extensions: 420
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)