Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22p08
(694 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.090
SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces pom... 28 1.1
SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.5
SPAC959.04c |||mannosyltransferase |Schizosaccharomyces pombe|ch... 26 4.5
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 5.9
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 25 7.9
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 25 7.9
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 31.9 bits (69), Expect = 0.090
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 230 NGKEKTELHQGSYMTGA--YRTNRDDVSGYVSTPSPTKTLSPAMVKLPGRKPCCLLTTRP 403
NG T + S T + + + +G ST S T T S ++ KLP LTT
Sbjct: 217 NGTNFTCIVNASNATNSTFWLNGTNSTNGTNSTNS-TSTTSHSLTKLPTSSKS--LTTSK 273
Query: 404 TKSLGNLTLATSSTMKAVPNQNTTDVSTDPRGD 502
T + G++T + NTTD +T+ D
Sbjct: 274 TTASGHITKGVMEALSTNDTTNTTDDATNTTSD 306
>SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 28.3 bits (60), Expect = 1.1
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +2
Query: 221 SRKNGKEKT-ELHQG-SYMTGAYRTNRDDVSGYVSTPSPTKTLSPAMVKLPGRKPCCLLT 394
SR N E++ E H+ +G + +SG PSP + PA + G++ +
Sbjct: 422 SRANTTEESAETHEVIEEKSGPPAAEEEPISGVAEKPSPNEEEQPA---IGGKEE--VDV 476
Query: 395 TRPTKSLGNLTLA-TSSTMKAVPNQNTTDVSTDPRGDGDR 511
TK GNL L T++ + + +N +V+ +G R
Sbjct: 477 EEVTKGTGNLELGETTTEVTILEQENAANVTRSQAQEGRR 516
>SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 608
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 245 TELHQGSYMTGAYR-TNRDDVSGYVSTPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLG 418
+ L S +T +Y+ ++ VS + PT +PA+ KLP + P T R T S G
Sbjct: 391 SSLETPSVLTSSYKPSSSSKVSAKSVSRKPTG--APAIPKLPPKHPSRQPTVRATPSTG 447
>SPAC959.04c |||mannosyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 298
Score = 26.2 bits (55), Expect = 4.5
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +2
Query: 50 CKYFAYVSYFQMTILRYNENLDNTVNYV 133
CKY+ + + +R+N+ N +NY+
Sbjct: 213 CKYWPFNEILSLKQIRHNQTYTNLINYL 240
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 302 VSGYVSTPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLG---NLTLATSSTMKAVPNQNT 472
VS + S+PSPT + S TT+ T + T T++T + P +
Sbjct: 528 VSSFSSSPSPTSSFSGTSALSSSSNEETTTTTQVTYTTSPEETTTTMTTTTCSSRPEETI 587
Query: 473 TDVST 487
+ VST
Sbjct: 588 STVST 592
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.4 bits (53), Expect = 7.9
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +2
Query: 311 YVSTPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTLATSSTMKAVPNQNTTDVSTD 490
YV TP PT + V PG +TT T + N T+ + + N T V+T
Sbjct: 271 YVETPYPTTVTTTTTVGYPGS-----VTTTLTGAPSNGTVIDTVEVPTTTNYGYTTVTTG 325
Query: 491 PRG 499
G
Sbjct: 326 YTG 328
Score = 25.4 bits (53), Expect = 7.9
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +2
Query: 311 YVSTPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTLATSSTMKAVPNQNTTDVSTD 490
YV TP PT + V PG +TT T + N T+ + + N T V+T
Sbjct: 349 YVETPYPTTVTTTTTVGYPGS-----VTTTLTGAPSNGTVIDTVEVPTTTNYGYTTVTTG 403
Query: 491 PRG 499
G
Sbjct: 404 YTG 406
Score = 25.4 bits (53), Expect = 7.9
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +2
Query: 311 YVSTPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTLATSSTMKAVPNQNTTDVSTD 490
YV TP PT + V PG +TT T + N T+ + + N T V+T
Sbjct: 583 YVETPYPTTVTTTTTVGYPGS-----VTTTLTGAPSNGTVIDTVEVPTTTNYGYTTVTTG 637
Query: 491 PRG 499
G
Sbjct: 638 YTG 640
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 235 KRENRITSGLIYDRRVSYEQRRRVWIRQHSVAHENIIPSNGEAAGTKTL 381
K EN + S ++Y +RR +W+ +H + N+ G+ G +L
Sbjct: 186 KLENYLESRIVYYLSNLRTRRRSIWLSRHGESQFNV---EGKIGGDSSL 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,472,259
Number of Sequences: 5004
Number of extensions: 51549
Number of successful extensions: 129
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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