Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22p08
(694 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0052 - 20510441-20510590,20510692-20511058,20511183-20511664 30 1.5
04_04_1704 - 35481041-35481461,35481682-35481810,35482291-354823... 30 1.5
01_06_1117 - 34633311-34634030,34634434-34634873,34635320-346353... 30 1.5
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 29 3.5
02_02_0138 + 7114949-7115656,7116388-7116435,7116830-7117988,711... 29 4.6
07_03_1595 + 28007003-28007031,28007978-28008560,28009088-28009399 28 6.1
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 28 6.1
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 28 6.1
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147... 28 8.1
05_05_0152 + 22762994-22763326,22763857-22763989,22764281-227643... 28 8.1
02_01_0333 + 2370032-2371075 28 8.1
>09_06_0052 - 20510441-20510590,20510692-20511058,20511183-20511664
Length = 332
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 245 TELHQGSYMTGAYRTNRDDVSGYVSTPSPTKTLSPAMVKLPGRKPCCLLTTRPTK-SLGN 421
TE+ G + A + D+ ++ T T+ A ++LP LL P +LG
Sbjct: 85 TEIEDGGGVETAKAVDGDEPQPFIRTVRSTRRRKAAAIRLPKAFRAALLPPPPPPCALGF 144
Query: 422 LTLATSSTMKAVPNQ 466
TS ++ +PN+
Sbjct: 145 TATTTSLMIRNIPNK 159
>04_04_1704 -
35481041-35481461,35481682-35481810,35482291-35482397,
35482515-35482583,35482825-35482936,35483013-35483131,
35483211-35483291,35483629-35483700,35484039-35484239,
35484442-35484528,35485284-35485523,35485991-35486455,
35487434-35487556,35487643-35487769,35487851-35487919,
35488061-35488189,35488628-35488722,35488808-35488876,
35489332-35489443,35489545-35489663,35489753-35489833,
35490898-35490969,35491052-35491267,35491524-35491601,
35491694-35491831,35492403-35492414,35492639-35492872,
35493076-35493130,35493222-35493352,35493813-35494546,
35494613-35494820
Length = 1634
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 323 PSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLGN 421
P P + PA VKL GR+ C L+T +S G+
Sbjct: 65 PPPPQEPEPAKVKLAGRRRLCKLSTAGDESAGD 97
>01_06_1117 -
34633311-34634030,34634434-34634873,34635320-34635370,
34635522-34635642
Length = 443
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 385 SADHTTH*EPRQSHISHFEYNESSSESKHNGRINRPEGRRRSRHKES 525
S HT R S SH++Y + S S + ++ + R+ SRH S
Sbjct: 241 SGSHTVKGHQRSSRKSHYKYKPAKSSSSRSSSGSKKD-RKHSRHSSS 286
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 305 SGYVSTPSPTKTLSPAMVKLPGRKPCCLLTTRPTKS--LGN-LTLATSSTMKAVPNQNTT 475
+G V+ PSP +L+P G P + +GN ++ +TS+T + +++
Sbjct: 287 AGVVAAPSPVTSLAPPPATAVGVSGGVRAPAEPPPAVVMGNVMSFSTSNTEEYSDEEDSD 346
Query: 476 DVSTDPRGDGDRD 514
D T+ G G D
Sbjct: 347 DEGTEDMGGGGGD 359
>02_02_0138 +
7114949-7115656,7116388-7116435,7116830-7117988,
7118336-7118424,7118697-7118732
Length = 679
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 210 TYSIVERMEKRKPNYIRAHI*QARIV 287
TYSI+ER+E R +R H+ A V
Sbjct: 621 TYSILERLESRSQRTVRIHVMNASFV 646
>07_03_1595 + 28007003-28007031,28007978-28008560,28009088-28009399
Length = 307
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 350 AMVKLPGRKPCCLLTTRPTKSLGNL-TLATSSTMKAVPNQNTTDVSTDPRGDGDR 511
A V P R C L T T LGN+ LA S + AV T V+ DG R
Sbjct: 162 ARVMAPRRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQTTVARQLARDGVR 216
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +2
Query: 299 DVSGYVSTPSPT--KTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTLATSSTMKAVPNQNT 472
D +G S +P K+ A+V++ P C+ ++LG L +S + AV
Sbjct: 614 DKAGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVVTR 673
Query: 473 TDVSTDPRGDGDRDIKNPSH 532
D RDIK+P H
Sbjct: 674 PCFGAHIVADSKRDIKDPEH 693
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +2
Query: 299 DVSGYVSTPSPT--KTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTLATSSTMKAVPNQNT 472
D +G S +P K+ A+V++ P C+ ++LG L +S + AV
Sbjct: 614 DKAGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVVTR 673
Query: 473 TDVSTDPRGDGDRDIKNPSH 532
D RDIK+P H
Sbjct: 674 PCFGAHIVADSKRDIKDPEH 693
>10_08_0959 - 21813756-21814097,21814462-21814570,21814688-21814740,
21814849-21815049,21815320-21815433,21815513-21815671,
21816490-21816849,21816928-21817149,21817967-21818093,
21818887-21819023,21819169-21819292,21819665-21820174,
21820255-21820436,21820812-21820862,21821114-21821266,
21821339-21821437,21821519-21821861,21821957-21822030,
21822105-21823025,21823133-21823257,21823419-21823461,
21823574-21823762,21824814-21825074,21825228-21825387,
21826200-21826363,21826523-21827009,21827090-21827431,
21827519-21827836,21828001-21828041,21828136-21828388,
21829158-21829261,21830198-21830386,21830543-21831196,
21831320-21831610,21831739-21831882,21832107-21832205,
21832549-21832657,21832739-21832923,21833008-21833121,
21833270-21833401,21833483-21833815,21833945-21834436,
21834773-21834847,21834917-21835066,21835143-21835241,
21835463-21835547,21837188-21837375,21837513-21837647,
21837729-21837849,21838127-21838194,21838275-21838370,
21838450-21838554,21838665-21838980,21839053-21839142,
21840011-21840181,21840850-21841010,21841088-21841270,
21841839-21841940,21842515-21842632,21842704-21842798,
21842972-21843022,21843107-21843241,21843333-21843436,
21844249-21844414,21844649-21844773,21845220-21845316
Length = 4181
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 95 RYNENLDNTVNY-VATLAFFCGISCVTIMLKFGGFKASLNIFNSRKN 232
+YN NLDN V VATL FFC V +++F N+ ++ KN
Sbjct: 1169 QYN-NLDNRVVISVATLTFFCHRPTVIAIMEFMNAINLANVPDADKN 1214
>05_05_0152 +
22762994-22763326,22763857-22763989,22764281-22764362,
22764786-22764939,22765028-22765162
Length = 278
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 323 PSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTL 430
PSP+ + S A V+LP P +T P L LT+
Sbjct: 77 PSPSPSPSVAFVRLPSEAPADASSTGPPPPLRRLTV 112
>02_01_0333 + 2370032-2371075
Length = 347
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 299 DVSGYVSTPSPTKTLSPAMVKLPGRK 376
D + Y S P P T P KLPG++
Sbjct: 47 DAAEYASLPCPAMTFYPPFSKLPGKQ 72
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,541,437
Number of Sequences: 37544
Number of extensions: 319689
Number of successful extensions: 885
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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