Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22p07
         (691 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0894 + 22346027-22347925                                         33   0.16 
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199...    30   1.5  
07_03_1614 + 28152812-28153204,28153301-28153585,28153676-281539...    30   2.0  
07_03_0632 - 20112297-20116562                                         30   2.0  
02_04_0244 - 21248449-21249038,21249240-21249438,21249963-212502...    29   3.5  
12_01_0891 - 8629832-8629999,8630158-8630346,8630664-8630972,863...    29   4.6  
07_03_1011 + 23292086-23292149,23292407-23293663,23294312-232943...    28   8.0  

>08_02_0894 + 22346027-22347925
          Length = 632

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -3

Query: 359 IARFEWTSFE--FWRQVRAVIIVISGLSAKALHCCLYEILDFLIRPFSILSAAPRVHPIP 186
           + R EW + E    R +RA    + G+ A     C     D  I   ++ +AAP  H  P
Sbjct: 215 VQRLEWKALEAKIRRWIRAARAAVRGVFASERRLCFLIFHDLPISNITVTAAAPATHDTP 274

Query: 185 F 183
           F
Sbjct: 275 F 275


>11_06_0315 +
           22318155-22318210,22319743-22319769,22319868-22319990,
           22320867-22321110,22321487-22321981
          Length = 314

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
 Frame = +3

Query: 222 REWTDEEIENFIKTTMKSLRGQSTYYNDYCAHLSPEFKTRPFKP-RDKKLKPCALKDDHV 398
           + W D +     K +  S   +    +     L P   ++  KP +D K    A+K+D  
Sbjct: 160 KSWKDSKSSKESKDSKSSKESKEPKPSKDSKQLKPPKVSKESKPLKDSKEDKKAVKEDKK 219

Query: 399 VEATPELGPKLAIKDT-ELMKLAKEIYERNMDEPTLETLP 515
             A      K A+KD+ EL K  K+  E+   + + E  P
Sbjct: 220 AAAKDSKEQKKALKDSKELKKALKDSKEQGSQKDSDELKP 259


>07_03_1614 +
           28152812-28153204,28153301-28153585,28153676-28153993,
           28154657-28154884,28155390-28155490,28156204-28156321,
           28156445-28156726
          Length = 574

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -3

Query: 305 IIVISGLSAKALHCCLYEILDFLIRPFSILSAAPRV 198
           +I + GL    + C LY + D+++   + L+A+P +
Sbjct: 185 VIKLDGLVTSRMSCSLYLVFDYMVHDLAGLAASPEI 220


>07_03_0632 - 20112297-20116562
          Length = 1421

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +3

Query: 105  EYFDEYRQHPIKKTKICRPEERWAKLEGNWMD-PRGGTQDR-EWTDEEIENFIKTTMKSL 278
            E  +EYRQ   KKT  C   E W K E  W++       D+ EW + E E+++K     L
Sbjct: 1331 ETINEYRQ---KKT--CEFWEGWLKYEEEWVESATDHLNDKGEWLENEEEDWLKNNSDEL 1385


>02_04_0244 -
           21248449-21249038,21249240-21249438,21249963-21250212,
           21250552-21250577
          Length = 354

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 17/141 (12%)
 Frame = +3

Query: 312 AHLSPEFKTRPFKPRDKKLKPCALKDDHVVEATPELGPKLAIKDTELMKLAKE--IYERN 485
           A   P  +T P    DKK+ P  LKD  V E +    P+  +++ E+ ++  +  I  RN
Sbjct: 100 ADYQPNGQT-PIPCTDKKITPTVLKDGTVEEFS---APR-RLREDEIPQIVDDFRIAARN 154

Query: 486 MDEPTLETLPTHLRILGYVRPCLYRTGLSD----YQGGVA---RLAYELVR-------DD 623
             E   + +  H    GY+     + G++D    Y G +A   R A E+++        D
Sbjct: 155 CIEAGFDGVEIHC-AFGYLIEQFMKDGVNDRTDKYGGSIANRCRFALEVIQAAIDEIGSD 213

Query: 624 RI-PRYRAHNGCRPRWGLPPD 683
           R+  R   ++ C   W   PD
Sbjct: 214 RVGVRLSPYSNCLDCWDSDPD 234


>12_01_0891 -
           8629832-8629999,8630158-8630346,8630664-8630972,
           8631023-8631229
          Length = 290

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 181 WKGIGWTRGAALRIENG 231
           WK +GWTR A   IE+G
Sbjct: 59  WKAVGWTRFAVKEIEDG 75


>07_03_1011 +
           23292086-23292149,23292407-23293663,23294312-23294316,
           23294566-23294593,23294664-23294724,23295205-23295259
          Length = 489

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 427 FGPSSGVASTTWSSFNAQGLSFLSRGLNGRVLNS 326
           F PS+   ++TWSS   Q L FL+   +  +LN+
Sbjct: 165 FPPSTATFNSTWSSIMLQYLQFLNNTASPFMLNA 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,754,412
Number of Sequences: 37544
Number of extensions: 357847
Number of successful extensions: 1109
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)