Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22p07
         (691 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98082-1|CAA66706.1| 1332|Drosophila melanogaster RADHA protein ...    31   1.9  
X98081-2|CAA66705.1| 1332|Drosophila melanogaster RADHA protein ...    31   1.9  
AE014297-3789|AAF56461.1| 1332|Drosophila melanogaster CG11908-P...    29   4.5  
AY052070-1|AAK93494.1|  854|Drosophila melanogaster SD02572p pro...    29   6.0  
AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p pro...    29   7.9  
AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA...    29   7.9  

>X98082-1|CAA66706.1| 1332|Drosophila melanogaster RADHA protein
            protein.
          Length = 1332

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 30/114 (26%), Positives = 45/114 (39%)
 Frame = +3

Query: 174  AKLEGNWMDPRGGTQDREWTDEEIENFIKTTMKSLRGQSTYYNDYCAHLSPEFKTRPFKP 353
            +K EGN         D E TD ++    K   K+L    T   DY      E   +P K 
Sbjct: 945  SKTEGNVKSKELIEPDVEQTDVQVLKK-KKLKKTLVTNDTVAQDY--ETLEEETIKPVKK 1001

Query: 354  RDKKLKPCALKDDHVVEATPELGPKLAIKDTELMKLAKEIYERNMDEPTLETLP 515
            +  + K   + +   +E T   GP   +   E  K+ K+  +   D PT+E  P
Sbjct: 1002 KIVRKKSSVILEK--IEDTENKGPADEVVSVEAKKIIKKKAKPACDNPTVEEYP 1053


>X98081-2|CAA66705.1| 1332|Drosophila melanogaster RADHA protein
            protein.
          Length = 1332

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 30/114 (26%), Positives = 45/114 (39%)
 Frame = +3

Query: 174  AKLEGNWMDPRGGTQDREWTDEEIENFIKTTMKSLRGQSTYYNDYCAHLSPEFKTRPFKP 353
            +K EGN         D E TD ++    K   K+L    T   DY      E   +P K 
Sbjct: 945  SKTEGNVKSKELIEPDVEQTDVQVLKK-KKLKKTLVTNDTVAQDY--ETLEEETIKPVKK 1001

Query: 354  RDKKLKPCALKDDHVVEATPELGPKLAIKDTELMKLAKEIYERNMDEPTLETLP 515
            +  + K   + +   +E T   GP   +   E  K+ K+  +   D PT+E  P
Sbjct: 1002 KIVRKKSSVILEK--IEDTENKGPADEVVSVEAKKIIKKKAKPACDNPTVEEYP 1053


>AE014297-3789|AAF56461.1| 1332|Drosophila melanogaster CG11908-PA
            protein.
          Length = 1332

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 30/114 (26%), Positives = 45/114 (39%)
 Frame = +3

Query: 174  AKLEGNWMDPRGGTQDREWTDEEIENFIKTTMKSLRGQSTYYNDYCAHLSPEFKTRPFKP 353
            +K EGN         D E TD ++    K   K+L    T   DY      E   +P K 
Sbjct: 945  SKTEGNVKCKELIEPDVEQTDVQVLKK-KKLKKTLVTNDTVAQDY--ETLEEETIKPVKK 1001

Query: 354  RDKKLKPCALKDDHVVEATPELGPKLAIKDTELMKLAKEIYERNMDEPTLETLP 515
            +  + K   + +   +E T   GP   +   E  K+ K+  +   D PT+E  P
Sbjct: 1002 KIVRKKSSVILEK--IEDTENKGPADEVVSVEAKKIIKKKAKPACDNPTVEEYP 1053


>AY052070-1|AAK93494.1|  854|Drosophila melanogaster SD02572p
           protein.
          Length = 854

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
 Frame = +3

Query: 243 IENFIKTTMKSLRGQSTYYNDYCAHLSPEFKTRPFKPR-DKKLKPCALKDDHVVEATPEL 419
           +ENF+    K +     Y  D+CA   P +K     PR  K L+   LK         EL
Sbjct: 761 VENFLLPDSKLMFDFYCYLYDWCAEFIPTWKRLEVDPRAAKALQKKRLKKQRQAARKVEL 820

Query: 420 GPKLAIKDTELMK 458
              +A  + E+++
Sbjct: 821 REAIADPNAEMVE 833


>AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p
           protein.
          Length = 595

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +3

Query: 564 GLSDYQGGVARLAYELVRDDRIPRYRAHNGCRPRWGLPP 680
           G+   + G+ ++ Y+ +++ R+P        RP W  PP
Sbjct: 383 GMCGRKNGLTQILYDNMKNYRVPEPTRQTTPRPEWAKPP 421


>AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA
           protein.
          Length = 595

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +3

Query: 564 GLSDYQGGVARLAYELVRDDRIPRYRAHNGCRPRWGLPP 680
           G+   + G+ ++ Y+ +++ R+P        RP W  PP
Sbjct: 383 GMCGRKNGLTQILYDNMKNYRVPEPTRQTTPRPEWAKPP 421


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,737,980
Number of Sequences: 53049
Number of extensions: 574474
Number of successful extensions: 1628
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)