Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22p07
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-12|CAH60774.1|  364|Caenorhabditis elegans Hypothetical p...    31   1.0  
Z81086-10|CAH60775.1|  364|Caenorhabditis elegans Hypothetical p...    31   1.0  
Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z48045-2|CAA88100.2|  967|Caenorhabditis elegans Hypothetical pr...    31   1.0  
AF435952-1|AAL30828.1|  967|Caenorhabditis elegans Ser/Thr prote...    31   1.0  
AL132862-6|CAB60535.2|  205|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z95559-14|CAJ76976.1|  338|Caenorhabditis elegans Hypothetical p...    28   7.2  
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    28   7.2  
Z81549-1|CAB04466.1|  343|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U13875-1|AAA21162.2|  541|Caenorhabditis elegans Yeast ula (ubiq...    28   7.2  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    27   9.6  
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    27   9.6  

>Z81523-12|CAH60774.1|  364|Caenorhabditis elegans Hypothetical
           protein F32H2.11 protein.
          Length = 364

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 278 KALHCCLYEILDFLIRPFSILSAAPRVHPIPFQFRPSLLRATYFRFLNRVLTIFI 114
           K  HCCL+ +L F I  F+ L     +  +P   R  + RAT +R LN  + I +
Sbjct: 7   KIRHCCLFFLLLFSICLFTRL-IFDDIQYVPISERFPISRATSYRHLNISVVIIV 60


>Z81086-10|CAH60775.1|  364|Caenorhabditis elegans Hypothetical
           protein F32H2.11 protein.
          Length = 364

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 278 KALHCCLYEILDFLIRPFSILSAAPRVHPIPFQFRPSLLRATYFRFLNRVLTIFI 114
           K  HCCL+ +L F I  F+ L     +  +P   R  + RAT +R LN  + I +
Sbjct: 7   KIRHCCLFFLLLFSICLFTRL-IFDDIQYVPISERFPISRATSYRHLNISVVIIV 60


>Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical
           protein T14G8.3b protein.
          Length = 905

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = +3

Query: 234 DEEIENFIKTTMKSLRGQSTYYNDYCAHLSPEFKTRPFKPRDKKLKP 374
           D+EI NF+ T      G + Y     AHLS  FK  PF   +K L P
Sbjct: 378 DKEISNFLNTDEAIAMG-AVYQ---AAHLSKSFKVLPFNVHEKILYP 420


>Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical
           protein T14G8.3a protein.
          Length = 921

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = +3

Query: 234 DEEIENFIKTTMKSLRGQSTYYNDYCAHLSPEFKTRPFKPRDKKLKP 374
           D+EI NF+ T      G + Y     AHLS  FK  PF   +K L P
Sbjct: 394 DKEISNFLNTDEAIAMG-AVYQ---AAHLSKSFKVLPFNVHEKILYP 436


>Z48045-2|CAA88100.2|  967|Caenorhabditis elegans Hypothetical
           protein C41C4.4 protein.
          Length = 967

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +3

Query: 297 YNDYCAHLSPEFKTRPFK 350
           +NDY AHL PE  T PFK
Sbjct: 191 FNDYSAHLLPEVNTWPFK 208


>AF435952-1|AAL30828.1|  967|Caenorhabditis elegans Ser/Thr protein
           kinase protein.
          Length = 967

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +3

Query: 297 YNDYCAHLSPEFKTRPFK 350
           +NDY AHL PE  T PFK
Sbjct: 191 FNDYSAHLLPEVNTWPFK 208


>AL132862-6|CAB60535.2|  205|Caenorhabditis elegans Hypothetical
           protein Y73F8A.10 protein.
          Length = 205

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 20/41 (48%), Positives = 22/41 (53%)
 Frame = -3

Query: 263 CLYEILDFLIRPFSILSAAPRVHPIPFQFRPSLLRATYFRF 141
           CLYEIL    +P S L+A P   P  F   P LL  T FRF
Sbjct: 100 CLYEILCAQNQPNSYLAAGP---PSVFTLNPYLL--TSFRF 135


>Z95559-14|CAJ76976.1|  338|Caenorhabditis elegans Hypothetical
           protein Y41E3.7c protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 417 LGPKLAIKDTELMKLAKEIYERNMDEPTLETLPTHL 524
           +  K AIKD EL + A ++ E++   P+L+ +   L
Sbjct: 19  IADKKAIKDAELKEFAPQVTEQSAQPPSLQQVDQRL 54


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 417 LGPKLAIKDTELMKLAKEIYERNMDEPTLETLPTHL 524
           +  K AIKD EL + A ++ E++   P+L+ +   L
Sbjct: 116 IADKKAIKDAELKEFAPQVTEQSAQPPSLQQVDQRL 151


>Z81549-1|CAB04466.1|  343|Caenorhabditis elegans Hypothetical
           protein F55C9.1 protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -3

Query: 224 SILSAAPRVHPIPFQFRPSLLRATYFRFLNRVLTIFIEIFC 102
           SI+   P+ HP P    PS    T  RF+N    I +  FC
Sbjct: 17  SIVCLFPKTHPFPLLRLPSKSLKTALRFMNGFQLILLS-FC 56


>U13875-1|AAA21162.2|  541|Caenorhabditis elegans Yeast ula
           (ubiquitin activating)homolog protein 1 protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 390 DHVVEATPELGPKLAIK-DTELMKLAKEIYERNMDEPTLETL 512
           +H +  + E  P+  ++ D    KL + I E N+DE TLE L
Sbjct: 165 EHTIANSHEENPRPDLRLDAPFSKLIEMINETNLDEMTLEQL 206


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 398 GGSYTRARSEAGHQGHGADETCKGDL*TEHGRTDSRDAA 514
           GG  +R+ S  G  GHG     +G     HGR  SR  +
Sbjct: 308 GGHGSRSGSPGGRHGHGGSGHHRGGRHGGHGRHGSRSGS 346


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 19/65 (29%), Positives = 25/65 (38%)
 Frame = +3

Query: 351 PRDKKLKPCALKDDHVVEATPELGPKLAIKDTELMKLAKEIYERNMDEPTLETLPTHLRI 530
           P +K      L+ D        + PKL +    L  LAKEI +R    P    +P   R 
Sbjct: 164 PMEKFFNKVILEADKKAVPKGSIDPKLKVDPKPLRLLAKEIADRETRNPLDPEIPILTRE 223

Query: 531 LGYVR 545
           L   R
Sbjct: 224 LATKR 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,568,897
Number of Sequences: 27780
Number of extensions: 291289
Number of successful extensions: 851
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)