Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22p01
         (475 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0508 + 3786655-3787158,3787542-3787904,3788003-3788088,378...    30   1.1  
05_06_0096 + 25513535-25514024,25514139-25514236,25514395-255147...    28   3.3  
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199...    27   7.7  

>07_01_0508 +
           3786655-3787158,3787542-3787904,3788003-3788088,
           3788164-3788217,3788838-3789020,3789716-3789737
          Length = 403

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +3

Query: 288 VMSMGYVDHLTPGGPRAY*RISQSVYKSIESLNKLSYLCFYYIIYAIENQQ*NRLNWY 461
           +++MG++ HL     +A  R +  + +    L+  SYL  Y+I + I N++   + WY
Sbjct: 217 ILAMGFLLHLHAKESKALQRFTSIIPRVF--LSCFSYLVMYHISFLIPNKKAAHIFWY 272


>05_06_0096 +
           25513535-25514024,25514139-25514236,25514395-25514783,
           25515485-25515599,25515816-25515917,25516584-25516734,
           25517162-25517250,25517518-25517566,25517723-25517763,
           25517929-25518116,25518285-25518402,25518900-25519079,
           25519172-25519294,25519368-25519455,25519549-25519679,
           25519768-25519866,25520822-25521253
          Length = 960

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -3

Query: 281 KAQRLKYHP*EVEGFIMLLS*VDEHTPHLIVSGCRRSI 168
           K   LK HP E++G +  L   DEHT  +++SG  RS+
Sbjct: 632 KEMELKLHP-ELKGPLRALC-EDEHTTVIVLSGSDRSV 667


>11_06_0315 +
           22318155-22318210,22319743-22319769,22319868-22319990,
           22320867-22321110,22321487-22321981
          Length = 314

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 11/53 (20%), Positives = 25/53 (47%)
 Frame = -2

Query: 285 SESSKIEVSPIGGRRLYYVAFVGRRTYASSDSEWLPSLNFLFIFYCFGGWASS 127
           S+    E+ P   +R+ +      +   +S+S+W P+  +  ++     W+SS
Sbjct: 250 SQKDSDELKPKSNKRVTFAEVEPEKELKASNSDWHPTSEYHSVYPEHNSWSSS 302


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,781,707
Number of Sequences: 37544
Number of extensions: 222630
Number of successful extensions: 336
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)