SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22p01
         (475 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022387-1|AAH22387.1|  542|Homo sapiens solute carrier family 2...    31   2.7  
AB042505-1|BAB47393.1|  542|Homo sapiens organic anion transport...    31   2.7  
BC133000-1|AAI33001.1|  164|Homo sapiens interleukin 31 protein.       29   6.2  
BC132998-1|AAI32999.1|  164|Homo sapiens interleukin 31 protein.       29   6.2  
AY499343-1|AAS86448.1|  164|Homo sapiens interleukin 31 protein.       29   6.2  

>BC022387-1|AAH22387.1|  542|Homo sapiens solute carrier family 22
           (organic anion transporter), member 8 protein.
          Length = 542

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 169 FFIYFLLLWWVGELTAHLVLSGYRS 95
           FF++FL  WW  E    LVLSG  S
Sbjct: 246 FFVFFLSSWWTPESIRWLVLSGKSS 270


>AB042505-1|BAB47393.1|  542|Homo sapiens organic anion transporter
           3 protein.
          Length = 542

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 169 FFIYFLLLWWVGELTAHLVLSGYRS 95
           FF++FL  WW  E    LVLSG  S
Sbjct: 246 FFVFFLSSWWTPESIRWLVLSGKSS 270


>BC133000-1|AAI33001.1|  164|Homo sapiens interleukin 31 protein.
          Length = 164

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 180 PSLNFLFIFYCFGGWASSQPI 118
           PS + LF+F C GGW +S  +
Sbjct: 7   PSTSVLFLFCCLGGWLASHTL 27


>BC132998-1|AAI32999.1|  164|Homo sapiens interleukin 31 protein.
          Length = 164

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 180 PSLNFLFIFYCFGGWASSQPI 118
           PS + LF+F C GGW +S  +
Sbjct: 7   PSTSVLFLFCCLGGWLASHTL 27


>AY499343-1|AAS86448.1|  164|Homo sapiens interleukin 31 protein.
          Length = 164

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 180 PSLNFLFIFYCFGGWASSQPI 118
           PS + LF+F C GGW +S  +
Sbjct: 7   PSTSVLFLFCCLGGWLASHTL 27


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,753,970
Number of Sequences: 237096
Number of extensions: 1245585
Number of successful extensions: 1319
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -