Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22o24
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   7.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.9  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 137 SYCSLICKVYNLKQHINGTQ 78
           S CSL C+V   K+++ G Q
Sbjct: 585 SVCSLPCEVGQAKKYVAGEQ 604


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 281 ALRKYIDIGANLTDDMYKGEY 343
           AL K +D+G N   + Y G +
Sbjct: 454 ALLKTLDLGENRISNFYNGSF 474


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 511 WMTSHSCE*LRICPRQLDCFFTV 443
           WM   +    +I    LDCFFT+
Sbjct: 546 WMLDLNSGLNKITRNSLDCFFTM 568


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 511 WMTSHSCE*LRICPRQLDCFFTV 443
           WM   +    +I    LDCFFT+
Sbjct: 546 WMLDLNSGLNKITRNSLDCFFTM 568


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/31 (19%), Positives = 18/31 (58%)
 Frame = +2

Query: 92  YVALNYIPYILVSNMINLMNNI*ETDKILQT 184
           ++ +NY  ++  ++++       E DK+L++
Sbjct: 16  FILINYFIFLYFNSLVRFRRFTIELDKVLES 46


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 436 TPSSNNNFVDATSPSSL 386
           +PSS ++F  + SP+SL
Sbjct: 92  SPSSPSSFFSSVSPTSL 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,160
Number of Sequences: 438
Number of extensions: 2919
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)