SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22o23
         (659 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC088360-1|AAH88360.1|  341|Homo sapiens GRHPR protein protein.        75   3e-13
BC000605-1|AAH00605.1|  328|Homo sapiens glyoxylate reductase/hy...    75   3e-13
AL158155-3|CAI13848.1|  328|Homo sapiens glyoxylate reductase/hy...    75   3e-13
AL158155-2|CAI13847.1|  395|Homo sapiens glyoxylate reductase/hy...    75   3e-13
AF146689-1|AAD46517.1|  328|Homo sapiens hydroxypyruvate reducta...    75   3e-13
AF146018-1|AAD45886.1|  328|Homo sapiens hydroxypyruvate reducta...    75   3e-13
AF134895-1|AAF00111.1|  328|Homo sapiens glyoxylate reductase pr...    75   3e-13
CR456795-1|CAG33076.1|  533|Homo sapiens PHGDH protein.                51   3e-06
BC011262-1|AAH11262.1|  533|Homo sapiens phosphoglycerate dehydr...    51   3e-06
BC001349-1|AAH01349.1|  533|Homo sapiens phosphoglycerate dehydr...    51   3e-06
BC000303-1|AAH00303.1|  533|Homo sapiens phosphoglycerate dehydr...    51   3e-06
AL589734-1|CAI22407.1|  533|Homo sapiens phosphoglycerate dehydr...    51   3e-06
AL139251-1|CAI22212.1|  533|Homo sapiens phosphoglycerate dehydr...    51   3e-06
AF171237-1|AAD51415.1|  533|Homo sapiens 3-phosphoglycerate dehy...    50   6e-06
AF006043-1|AAB88664.1|  533|Homo sapiens 3-phosphoglycerate dehy...    50   6e-06
AL589734-3|CAI22409.1|  499|Homo sapiens phosphoglycerate dehydr...    44   4e-04
AL139251-2|CAI22213.1|  499|Homo sapiens phosphoglycerate dehydr...    44   4e-04
AK127075-1|BAC86814.1| 1332|Homo sapiens protein ( Homo sapiens ...    30   6.4  
BC107087-1|AAI07088.1|  235|Homo sapiens SRRM2 protein protein.        30   8.4  
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.             30   8.4  
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro...    30   8.4  
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro...    30   8.4  
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.     30   8.4  

>BC088360-1|AAH88360.1|  341|Homo sapiens GRHPR protein protein.
          Length = 341

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 35/92 (38%), Positives = 61/92 (66%)
 Frame = +1

Query: 382 EEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTN 561
           +E+ + + G   L+ + +  +   ILDAAGA LK++ST+S G +H   +E++ RGI++  
Sbjct: 56  KELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGY 115

Query: 562 TPNVLSPAVAEVAVGLILSASRRFTENLDQVR 657
           TP+VL+   AE+AV L+L+  RR  E +++V+
Sbjct: 116 TPDVLTDTTAELAVSLLLTTCRRLPEAIEEVK 147


>BC000605-1|AAH00605.1|  328|Homo sapiens glyoxylate
           reductase/hydroxypyruvate reductase protein.
          Length = 328

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 35/92 (38%), Positives = 61/92 (66%)
 Frame = +1

Query: 382 EEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTN 561
           +E+ + + G   L+ + +  +   ILDAAGA LK++ST+S G +H   +E++ RGI++  
Sbjct: 43  KELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGY 102

Query: 562 TPNVLSPAVAEVAVGLILSASRRFTENLDQVR 657
           TP+VL+   AE+AV L+L+  RR  E +++V+
Sbjct: 103 TPDVLTDTTAELAVSLLLTTCRRLPEAIEEVK 134


>AL158155-3|CAI13848.1|  328|Homo sapiens glyoxylate
           reductase/hydroxypyruvate reductase protein.
          Length = 328

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 35/92 (38%), Positives = 61/92 (66%)
 Frame = +1

Query: 382 EEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTN 561
           +E+ + + G   L+ + +  +   ILDAAGA LK++ST+S G +H   +E++ RGI++  
Sbjct: 43  KELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGY 102

Query: 562 TPNVLSPAVAEVAVGLILSASRRFTENLDQVR 657
           TP+VL+   AE+AV L+L+  RR  E +++V+
Sbjct: 103 TPDVLTDTTAELAVSLLLTTCRRLPEAIEEVK 134


>AL158155-2|CAI13847.1|  395|Homo sapiens glyoxylate
           reductase/hydroxypyruvate reductase protein.
          Length = 395

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 35/92 (38%), Positives = 61/92 (66%)
 Frame = +1

Query: 382 EEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTN 561
           +E+ + + G   L+ + +  +   ILDAAGA LK++ST+S G +H   +E++ RGI++  
Sbjct: 43  KELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGY 102

Query: 562 TPNVLSPAVAEVAVGLILSASRRFTENLDQVR 657
           TP+VL+   AE+AV L+L+  RR  E +++V+
Sbjct: 103 TPDVLTDTTAELAVSLLLTTCRRLPEAIEEVK 134


>AF146689-1|AAD46517.1|  328|Homo sapiens hydroxypyruvate reductase
           protein.
          Length = 328

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 35/92 (38%), Positives = 61/92 (66%)
 Frame = +1

Query: 382 EEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTN 561
           +E+ + + G   L+ + +  +   ILDAAGA LK++ST+S G +H   +E++ RGI++  
Sbjct: 43  KELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGY 102

Query: 562 TPNVLSPAVAEVAVGLILSASRRFTENLDQVR 657
           TP+VL+   AE+AV L+L+  RR  E +++V+
Sbjct: 103 TPDVLTDTTAELAVSLLLTTCRRLPEAIEEVK 134


>AF146018-1|AAD45886.1|  328|Homo sapiens hydroxypyruvate reductase
           protein.
          Length = 328

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 35/92 (38%), Positives = 61/92 (66%)
 Frame = +1

Query: 382 EEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTN 561
           +E+ + + G   L+ + +  +   ILDAAGA LK++ST+S G +H   +E++ RGI++  
Sbjct: 43  KELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGY 102

Query: 562 TPNVLSPAVAEVAVGLILSASRRFTENLDQVR 657
           TP+VL+   AE+AV L+L+  RR  E +++V+
Sbjct: 103 TPDVLTDTTAELAVSLLLTTCRRLPEAIEEVK 134


>AF134895-1|AAF00111.1|  328|Homo sapiens glyoxylate reductase
           protein.
          Length = 328

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 35/92 (38%), Positives = 61/92 (66%)
 Frame = +1

Query: 382 EEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTN 561
           +E+ + + G   L+ + +  +   ILDAAGA LK++ST+S G +H   +E++ RGI++  
Sbjct: 43  KELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGY 102

Query: 562 TPNVLSPAVAEVAVGLILSASRRFTENLDQVR 657
           TP+VL+   AE+AV L+L+  RR  E +++V+
Sbjct: 103 TPDVLTDTTAELAVSLLLTTCRRLPEAIEEVK 134


>CR456795-1|CAG33076.1|  533|Homo sapiens PHGDH protein.
          Length = 533

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 33/128 (25%), Positives = 65/128 (50%)
 Frame = +1

Query: 256 NLKVLVSSNDYPPTALKLLEDHFTVLQSRYLNFGQEGSTLGREEILKLIPGCSALVWISN 435
           NL+ ++ S+   P   K+L+D    +         E   L +EE++  +  C  L+  S 
Sbjct: 5   NLRKVLISDSLDPCCRKILQDGGLQVV--------EKQNLSKEELIAELQDCEGLIVRSA 56

Query: 436 LPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLIL 615
             +T ++++AA  +L++V     G ++ + E    +GI + NTPN  S + AE+  G+I+
Sbjct: 57  TKVTADVINAA-EKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIM 115

Query: 616 SASRRFTE 639
             +R+  +
Sbjct: 116 CLARQIPQ 123


>BC011262-1|AAH11262.1|  533|Homo sapiens phosphoglycerate
           dehydrogenase protein.
          Length = 533

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 33/128 (25%), Positives = 65/128 (50%)
 Frame = +1

Query: 256 NLKVLVSSNDYPPTALKLLEDHFTVLQSRYLNFGQEGSTLGREEILKLIPGCSALVWISN 435
           NL+ ++ S+   P   K+L+D    +         E   L +EE++  +  C  L+  S 
Sbjct: 5   NLRKVLISDSLDPCCRKILQDGGLQVV--------EKQNLSKEELIAELQDCEGLIVRSA 56

Query: 436 LPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLIL 615
             +T ++++AA  +L++V     G ++ + E    +GI + NTPN  S + AE+  G+I+
Sbjct: 57  TKVTADVINAA-EKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIM 115

Query: 616 SASRRFTE 639
             +R+  +
Sbjct: 116 CLARQIPQ 123


>BC001349-1|AAH01349.1|  533|Homo sapiens phosphoglycerate
           dehydrogenase protein.
          Length = 533

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 33/128 (25%), Positives = 65/128 (50%)
 Frame = +1

Query: 256 NLKVLVSSNDYPPTALKLLEDHFTVLQSRYLNFGQEGSTLGREEILKLIPGCSALVWISN 435
           NL+ ++ S+   P   K+L+D    +         E   L +EE++  +  C  L+  S 
Sbjct: 5   NLRKVLISDSLDPCCRKILQDGGLQVV--------EKQNLSKEELIAELQDCEGLIVRSA 56

Query: 436 LPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLIL 615
             +T ++++AA  +L++V     G ++ + E    +GI + NTPN  S + AE+  G+I+
Sbjct: 57  TKVTADVINAA-EKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIM 115

Query: 616 SASRRFTE 639
             +R+  +
Sbjct: 116 CLARQIPQ 123


>BC000303-1|AAH00303.1|  533|Homo sapiens phosphoglycerate
           dehydrogenase protein.
          Length = 533

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 33/128 (25%), Positives = 65/128 (50%)
 Frame = +1

Query: 256 NLKVLVSSNDYPPTALKLLEDHFTVLQSRYLNFGQEGSTLGREEILKLIPGCSALVWISN 435
           NL+ ++ S+   P   K+L+D    +         E   L +EE++  +  C  L+  S 
Sbjct: 5   NLRKVLISDSLDPCCRKILQDGGLQVV--------EKQNLSKEELIAELQDCEGLIVRSA 56

Query: 436 LPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLIL 615
             +T ++++AA  +L++V     G ++ + E    +GI + NTPN  S + AE+  G+I+
Sbjct: 57  TKVTADVINAA-EKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIM 115

Query: 616 SASRRFTE 639
             +R+  +
Sbjct: 116 CLARQIPQ 123


>AL589734-1|CAI22407.1|  533|Homo sapiens phosphoglycerate
           dehydrogenase protein.
          Length = 533

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 33/128 (25%), Positives = 65/128 (50%)
 Frame = +1

Query: 256 NLKVLVSSNDYPPTALKLLEDHFTVLQSRYLNFGQEGSTLGREEILKLIPGCSALVWISN 435
           NL+ ++ S+   P   K+L+D    +         E   L +EE++  +  C  L+  S 
Sbjct: 5   NLRKVLISDSLDPCCRKILQDGGLQVV--------EKQNLSKEELIAELQDCEGLIVRSA 56

Query: 436 LPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLIL 615
             +T ++++AA  +L++V     G ++ + E    +GI + NTPN  S + AE+  G+I+
Sbjct: 57  TKVTADVINAA-EKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIM 115

Query: 616 SASRRFTE 639
             +R+  +
Sbjct: 116 CLARQIPQ 123


>AL139251-1|CAI22212.1|  533|Homo sapiens phosphoglycerate
           dehydrogenase protein.
          Length = 533

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 33/128 (25%), Positives = 65/128 (50%)
 Frame = +1

Query: 256 NLKVLVSSNDYPPTALKLLEDHFTVLQSRYLNFGQEGSTLGREEILKLIPGCSALVWISN 435
           NL+ ++ S+   P   K+L+D    +         E   L +EE++  +  C  L+  S 
Sbjct: 5   NLRKVLISDSLDPCCRKILQDGGLQVV--------EKQNLSKEELIAELQDCEGLIVRSA 56

Query: 436 LPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLIL 615
             +T ++++AA  +L++V     G ++ + E    +GI + NTPN  S + AE+  G+I+
Sbjct: 57  TKVTADVINAA-EKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIM 115

Query: 616 SASRRFTE 639
             +R+  +
Sbjct: 116 CLARQIPQ 123


>AF171237-1|AAD51415.1|  533|Homo sapiens 3-phosphoglycerate
           dehydrogenase protein.
          Length = 533

 Score = 50.4 bits (115), Expect = 6e-06
 Identities = 26/93 (27%), Positives = 51/93 (54%)
 Frame = +1

Query: 361 EGSTLGREEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRA 540
           E   L +EE++  +  C  L+  S   +T ++++AA  +L++V     G ++ + E    
Sbjct: 32  EKQNLSKEELIAELQDCEGLIVRSATKVTADVINAA-EKLQVVGRAGTGVDNVDLEAATR 90

Query: 541 RGIQLTNTPNVLSPAVAEVAVGLILSASRRFTE 639
           +GI + NTPN  S + AE+  G+I+  +R+  +
Sbjct: 91  KGILVMNTPNGNSLSAAELTCGMIMCLARQIPQ 123


>AF006043-1|AAB88664.1|  533|Homo sapiens 3-phosphoglycerate
           dehydrogenase protein.
          Length = 533

 Score = 50.4 bits (115), Expect = 6e-06
 Identities = 26/93 (27%), Positives = 51/93 (54%)
 Frame = +1

Query: 361 EGSTLGREEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRA 540
           E   L +EE++  +  C  L+  S   +T ++++AA  +L++V     G ++ + E    
Sbjct: 32  EKQNLSKEELIAELQDCEGLIVRSATKVTADVINAA-EKLQVVGRAGTGVDNVDLEAATR 90

Query: 541 RGIQLTNTPNVLSPAVAEVAVGLILSASRRFTE 639
           +GI + NTPN  S + AE+  G+I+  +R+  +
Sbjct: 91  KGILVMNTPNGNSLSAAELTCGMIMCLARQIPQ 123


>AL589734-3|CAI22409.1|  499|Homo sapiens phosphoglycerate
           dehydrogenase protein.
          Length = 499

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 23/81 (28%), Positives = 45/81 (55%)
 Frame = +1

Query: 397 LIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVL 576
           L+  C  L+  S   +T ++++AA  +L++V     G ++ + E    +GI + NTPN  
Sbjct: 10  LLQDCEGLIVRSATKVTADVINAA-EKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGN 68

Query: 577 SPAVAEVAVGLILSASRRFTE 639
           S + AE+  G+I+  +R+  +
Sbjct: 69  SLSAAELTCGMIMCLARQIPQ 89


>AL139251-2|CAI22213.1|  499|Homo sapiens phosphoglycerate
           dehydrogenase protein.
          Length = 499

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 23/81 (28%), Positives = 45/81 (55%)
 Frame = +1

Query: 397 LIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVL 576
           L+  C  L+  S   +T ++++AA  +L++V     G ++ + E    +GI + NTPN  
Sbjct: 10  LLQDCEGLIVRSATKVTADVINAA-EKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGN 68

Query: 577 SPAVAEVAVGLILSASRRFTE 639
           S + AE+  G+I+  +R+  +
Sbjct: 69  SLSAAELTCGMIMCLARQIPQ 89


>AK127075-1|BAC86814.1| 1332|Homo sapiens protein ( Homo sapiens cDNA
            FLJ45132 fis, clone BRAWH3037979, highly  similar to
            Ubiquitin carboxyl-terminal hydrolase 24 (EC 3.1.2.15).
            ).
          Length = 1332

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +3

Query: 339  KVFKLWSRRKHVRQRRDPKAYPGMFSSSLDL*SSY 443
            K+FK+W++  +VR+++D  AY G F+S +D    Y
Sbjct: 1007 KIFKMWNKELYVREQQD--AY-GFFTSLIDQMDEY 1038


>BC107087-1|AAI07088.1|  235|Homo sapiens SRRM2 protein protein.
          Length = 235

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +2

Query: 446 RMKSLTQPVHN*RS*ARSPPVTTTATPRSCARGVYS*RTPRTSCPRPLQRLPWGSYCRPL 625
           R +S T P     S +R+PPV   ++  SC        TP   C  P    P GS   P+
Sbjct: 16  RSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGMLEPLGSSRTPM 75


>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
          Length = 1791

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +2

Query: 446  RMKSLTQPVHN*RS*ARSPPVTTTATPRSCARGVYS*RTPRTSCPRPLQRLPWGSYCRPL 625
            R +S T P     S +R+PPV   ++  SC        TP   C  P    P GS   P+
Sbjct: 1119 RSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGMLEPLGSSRTPM 1178


>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
          Length = 2752

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +2

Query: 446  RMKSLTQPVHN*RS*ARSPPVTTTATPRSCARGVYS*RTPRTSCPRPLQRLPWGSYCRPL 625
            R +S T P     S +R+PPV   ++  SC        TP   C  P    P GS   P+
Sbjct: 2087 RSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGMLEPLGSSRTPM 2146


>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
           protein.
          Length = 1275

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +2

Query: 446 RMKSLTQPVHN*RS*ARSPPVTTTATPRSCARGVYS*RTPRTSCPRPLQRLPWGSYCRPL 625
           R +S T P     S +R+PPV   ++  SC        TP   C  P    P GS   P+
Sbjct: 610 RSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGMLEPLGSSRTPM 669


>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
          Length = 2800

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +2

Query: 446  RMKSLTQPVHN*RS*ARSPPVTTTATPRSCARGVYS*RTPRTSCPRPLQRLPWGSYCRPL 625
            R +S T P     S +R+PPV   ++  SC        TP   C  P    P GS   P+
Sbjct: 2135 RSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGMLEPLGSSRTPM 2194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,354,717
Number of Sequences: 237096
Number of extensions: 1754548
Number of successful extensions: 4468
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4463
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -