Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22o19
(457 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 100 5e-21
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 100 5e-21
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 100 5e-21
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 100 5e-21
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 99 6e-21
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 97 3e-20
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 93 5e-19
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 29 10.0
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 29 10.0
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 29 10.0
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 29 10.0
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 29 10.0
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 29 10.0
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 29 10.0
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 29 10.0
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 99.5 bits (237), Expect = 5e-21
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +1
Query: 19 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 198
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 199 TNIGSG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 354
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 99.5 bits (237), Expect = 5e-21
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +1
Query: 19 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 198
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 199 TNIGSG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 354
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 99.5 bits (237), Expect = 5e-21
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +1
Query: 19 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 198
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 199 TNIGSG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 354
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 99.5 bits (237), Expect = 5e-21
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +1
Query: 19 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 198
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 199 TNIGSG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 354
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 99.1 bits (236), Expect = 6e-21
Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +1
Query: 19 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 198
M S +ELAC+YSAL+L DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALVLHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 199 TNIGSG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 354
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 97.1 bits (231), Expect = 3e-20
Identities = 51/113 (45%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Frame = +1
Query: 19 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 198
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 199 TNIGSG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLF 351
N+G+G SDDDMGFGLF
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLF 113
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 92.7 bits (220), Expect = 5e-19
Identities = 50/114 (43%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +1
Query: 19 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 198
M S +ELA +YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELARIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 199 TNIGSG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 354
++G+G SDDDMGFGLFD
Sbjct: 61 CDVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 322 SDDDMGFGLFD 354
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 322 SDDDMGFGLFD 354
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 322 SDDDMGFGLFD 354
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 322 SDDDMGFGLFD 354
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 322 SDDDMGFGLFD 354
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 322 SDDDMGFGLFD 354
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 322 SDDDMGFGLFD 354
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 322 SDDDMGFGLFD 354
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,897,821
Number of Sequences: 237096
Number of extensions: 831572
Number of successful extensions: 1381
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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