Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22o16
(404 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U89336-4|AAB47492.1| 180|Homo sapiens G16 protein. 29 5.9
BX284686-14|CAM26222.1| 180|Homo sapiens ring finger protein 5 ... 29 5.9
BT007105-1|AAP35769.1| 180|Homo sapiens ring finger protein 5 p... 29 5.9
BC127652-1|AAI27653.1| 180|Homo sapiens ring finger protein 5 p... 29 5.9
BC127651-1|AAI27652.1| 180|Homo sapiens ring finger protein 5 p... 29 5.9
BC119742-1|AAI19743.1| 180|Homo sapiens RNF5P1 protein protein. 29 5.9
BC119741-1|AAI19742.1| 180|Homo sapiens ring finger protein 5 p... 29 5.9
BC111392-1|AAI11393.1| 180|Homo sapiens RNF5 protein protein. 29 5.9
BC004155-1|AAH04155.1| 180|Homo sapiens ring finger protein 5 p... 29 5.9
AL845464-14|CAI41808.1| 180|Homo sapiens ring finger protein 5 ... 29 5.9
AL662884-19|CAI18351.1| 180|Homo sapiens ring finger protein 5 ... 29 5.9
AL662830-1|CAI17532.1| 180|Homo sapiens ring finger protein 5 p... 29 5.9
AB056869-1|BAB39359.1| 180|Homo sapiens HsRma1 protein. 29 5.9
CR456349-1|CAG30235.1| 192|Homo sapiens Em:AC005005.6 protein. 29 7.8
BC113014-1|AAI13015.1| 245|Homo sapiens ring finger protein 151... 29 7.8
BC035684-1|AAH35684.1| 192|Homo sapiens ring finger protein 185... 29 7.8
BC033166-1|AAH33166.1| 192|Homo sapiens ring finger protein 185... 29 7.8
BC029501-1|AAH29501.2| 244|Homo sapiens RNF151 protein protein. 29 7.8
BC026040-1|AAH26040.1| 192|Homo sapiens ring finger protein 185... 29 7.8
BC012817-1|AAH12817.1| 192|Homo sapiens RNF185 protein protein. 29 7.8
BC009504-1|AAH09504.1| 192|Homo sapiens RNF185 protein protein. 29 7.8
>U89336-4|AAB47492.1| 180|Homo sapiens G16 protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>BX284686-14|CAM26222.1| 180|Homo sapiens ring finger protein 5
protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>BT007105-1|AAP35769.1| 180|Homo sapiens ring finger protein 5
protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>BC127652-1|AAI27653.1| 180|Homo sapiens ring finger protein 5
protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>BC127651-1|AAI27652.1| 180|Homo sapiens ring finger protein 5
protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>BC119742-1|AAI19743.1| 180|Homo sapiens RNF5P1 protein protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>BC119741-1|AAI19742.1| 180|Homo sapiens ring finger protein 5
protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>BC111392-1|AAI11393.1| 180|Homo sapiens RNF5 protein protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>BC004155-1|AAH04155.1| 180|Homo sapiens ring finger protein 5
protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>AL845464-14|CAI41808.1| 180|Homo sapiens ring finger protein 5
protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>AL662884-19|CAI18351.1| 180|Homo sapiens ring finger protein 5
protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>AL662830-1|CAI17532.1| 180|Homo sapiens ring finger protein 5
protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>AB056869-1|BAB39359.1| 180|Homo sapiens HsRma1 protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C +T + + HL+C C H+++ T P+R
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61
>CR456349-1|CAG30235.1| 192|Homo sapiens Em:AC005005.6 protein.
Length = 192
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C T I HLFC C H+++ T P R
Sbjct: 39 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNR 73
>BC113014-1|AAI13015.1| 245|Homo sapiens ring finger protein 151
protein.
Length = 245
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 139 LCCVCHKTPLQ-TRIYHSHLFCTECFHKYIWTAPKRDC 249
+C VCH + R+ SH+FC +C + W A ++ C
Sbjct: 19 VCSVCHGVLKRPARLPCSHIFCKKCILR--WLARQKTC 54
>BC035684-1|AAH35684.1| 192|Homo sapiens ring finger protein 185
protein.
Length = 192
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C T I HLFC C H+++ T P R
Sbjct: 39 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNR 73
>BC033166-1|AAH33166.1| 192|Homo sapiens ring finger protein 185
protein.
Length = 192
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C T I HLFC C H+++ T P R
Sbjct: 39 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNR 73
>BC029501-1|AAH29501.2| 244|Homo sapiens RNF151 protein protein.
Length = 244
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 139 LCCVCHKTPLQ-TRIYHSHLFCTECFHKYIWTAPKRDC 249
+C VCH + R+ SH+FC +C + W A ++ C
Sbjct: 18 VCSVCHGVLKRPARLPCSHIFCKKCILR--WLARQKTC 53
>BC026040-1|AAH26040.1| 192|Homo sapiens ring finger protein 185
protein.
Length = 192
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C T I HLFC C H+++ T P R
Sbjct: 39 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNR 73
>BC012817-1|AAH12817.1| 192|Homo sapiens RNF185 protein protein.
Length = 192
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C T I HLFC C H+++ T P R
Sbjct: 39 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNR 73
>BC009504-1|AAH09504.1| 192|Homo sapiens RNF185 protein protein.
Length = 192
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 243
C +C T I HLFC C H+++ T P R
Sbjct: 39 CNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNR 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,176,151
Number of Sequences: 237096
Number of extensions: 1188606
Number of successful extensions: 2600
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2600
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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