Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22o13
         (720 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016450-13|AAB65988.2|  472|Caenorhabditis elegans Hypothetical...    31   1.1  
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z92809-4|CAI06053.1|  615|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AM748822-1|CAO72176.1|  591|Caenorhabditis elegans hexosaminidas...    29   3.3  
AL023839-4|CAA19506.2|  615|Caenorhabditis elegans Hypothetical ...    29   3.3  
U46669-3|AAA85744.2|  737|Caenorhabditis elegans Regulator of g ...    28   7.7  
AF040659-1|AAK39389.1|  332|Caenorhabditis elegans Hypothetical ...    28   7.7  

>AF016450-13|AAB65988.2|  472|Caenorhabditis elegans Hypothetical
           protein B0238.9 protein.
          Length = 472

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 701 SHESYSXETKGQYDSTNKAXSIKCSCLYSXFY 606
           S  S++ ET GQYD+  +     C C++   Y
Sbjct: 218 SESSFAGETNGQYDNNQEPHPSNCECVFHHDY 249


>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
           protein F54D11.2 protein.
          Length = 1145

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
 Frame = +3

Query: 126 KLAMCIALPAEQSGAQLGTTVPVPHD-IPQAPGKPEENATAVXPTKQNTTSAVDTKTDDK 302
           K A  +A P   +  Q     P P   +P+   K E+  T   P K   TSA  T+   +
Sbjct: 189 KEAEALAPPEPPAEPQEAAETPAPEPLVPEKKPKIEDAPTTSSPKKSTPTSAPPTRASAR 248

Query: 303 XVKP 314
             KP
Sbjct: 249 VSKP 252


>Z92809-4|CAI06053.1|  615|Caenorhabditis elegans Hypothetical
           protein Y39A1C.4 protein.
          Length = 615

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/75 (24%), Positives = 26/75 (34%)
 Frame = +3

Query: 105 LAFVCLLKLAMCIALPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVXPTKQNTTSAVD 284
           L ++C++ +    A    +S       VP P D    P  P +   A  P    TT    
Sbjct: 17  LIYLCIVTIIFLFATSQFKSTTTHARFVPEPSDPRLHPNSPLQAPKAQEPAAAETTKKPS 76

Query: 285 TKTDDKXVKPEAEKV 329
            +      KP  E V
Sbjct: 77  RQPHHTTAKPRTENV 91


>AM748822-1|CAO72176.1|  591|Caenorhabditis elegans hexosaminidase
           protein.
          Length = 591

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/75 (24%), Positives = 26/75 (34%)
 Frame = +3

Query: 105 LAFVCLLKLAMCIALPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVXPTKQNTTSAVD 284
           L ++C++ +    A    +S       VP P D    P  P +   A  P    TT    
Sbjct: 17  LIYLCIVTIIFLFATSQFKSTTTHARFVPEPSDPRLHPNSPLQAPKAQEPAAAETTKKPS 76

Query: 285 TKTDDKXVKPEAEKV 329
            +      KP  E V
Sbjct: 77  RQPHHTTAKPRTENV 91


>AL023839-4|CAA19506.2|  615|Caenorhabditis elegans Hypothetical
           protein Y39A1C.4 protein.
          Length = 615

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/75 (24%), Positives = 26/75 (34%)
 Frame = +3

Query: 105 LAFVCLLKLAMCIALPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVXPTKQNTTSAVD 284
           L ++C++ +    A    +S       VP P D    P  P +   A  P    TT    
Sbjct: 17  LIYLCIVTIIFLFATSQFKSTTTHARFVPEPSDPRLHPNSPLQAPKAQEPAAAETTKKPS 76

Query: 285 TKTDDKXVKPEAEKV 329
            +      KP  E V
Sbjct: 77  RQPHHTTAKPRTENV 91


>U46669-3|AAA85744.2|  737|Caenorhabditis elegans Regulator of g
           protein signalingprotein 6 protein.
          Length = 737

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 219 GKPEENATAVXPTKQNTTSAVDTKTDDKXVKPEAEK 326
           G    ++  V    +N  S   +KT+ K VKPE+EK
Sbjct: 544 GSASTSSNNVSEPSKNRLSIFKSKTEKKVVKPESEK 579


>AF040659-1|AAK39389.1|  332|Caenorhabditis elegans Hypothetical
           protein ZK484.3 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/65 (24%), Positives = 27/65 (41%)
 Frame = +3

Query: 141 IALPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVXPTKQNTTSAVDTKTDDKXVKPEA 320
           I  P+ +      +  PVP  +P+    P   AT    T   TT+A   K ++   +   
Sbjct: 164 IKTPSSEPAELTSSAAPVPVAVPEV---PTAEATTSATTTPTTTNATIVKKEETKAEQPV 220

Query: 321 EKVTE 335
           +KV +
Sbjct: 221 KKVVK 225


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,254,791
Number of Sequences: 27780
Number of extensions: 196788
Number of successful extensions: 584
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)