Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22o08
         (616 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22VB3 Cluster: Putative uncharacterized protein; n=2; ...    39   0.11 
UniRef50_UPI000150ABDF Cluster: DHHC zinc finger domain containi...    36   1.0  
UniRef50_UPI00006CFF84 Cluster: hypothetical protein TTHERM_0072...    35   1.3  
UniRef50_Q30IA4 Cluster: Cytochrome oxidase subunit II; n=1; Dic...    35   1.8  
UniRef50_Q1NLI0 Cluster: NADH-quinone oxidoreductase; n=3; delta...    33   4.1  
UniRef50_A5L2V1 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  

>UniRef50_Q22VB3 Cluster: Putative uncharacterized protein; n=2;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1528

 Score = 38.7 bits (86), Expect = 0.11
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 442  PFIYLETLTKQVKDGSSYGEKNSIQQCLHICWSCTENIYKKC 567
            P++YL T  +   DG+   E N  QQC  +C SC+    K C
Sbjct: 1219 PYLYLNTCLQICPDGTFSDENNKCQQCHPLCKSCSSKSSKSC 1260


>UniRef50_UPI000150ABDF Cluster: DHHC zinc finger domain containing
            protein; n=1; Tetrahymena thermophila SB210|Rep: DHHC
            zinc finger domain containing protein - Tetrahymena
            thermophila SB210
          Length = 4579

 Score = 35.5 bits (78), Expect = 1.0
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +1

Query: 433  EKC----PFIYLETLTKQVKDGSSYGEKNSIQQCLHICWSCTENIYKKC 567
            EKC    PF+YL T  ++  +G+   E+N  Q+C  +C +C+  +   C
Sbjct: 2648 EKCDHSYPFLYLNTCLEKCPEGTYADEQNICQRCHPLCRTCSFKLATSC 2696


>UniRef50_UPI00006CFF84 Cluster: hypothetical protein TTHERM_00723060;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00723060 - Tetrahymena thermophila SB210
          Length = 1554

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 433  EKCPFIYLETLTKQVKDGSSYGEKNSIQQCLHICWSCTENIYKKC 567
            +K P+++L T  +   +G+   E N  +QC  +C +CT      C
Sbjct: 1121 KKYPYLHLNTCLESCPEGTYSNENNECEQCHPLCANCTSKSSNDC 1165


>UniRef50_Q30IA4 Cluster: Cytochrome oxidase subunit II; n=1;
           Dichroplus maculipennis|Rep: Cytochrome oxidase subunit
           II - Dichroplus maculipennis
          Length = 123

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 599 FLMRPLCWMPQHFLYMFSVQDQQMCKHC 516
           +++ P CW P HF Y FS  +   C  C
Sbjct: 63  WILAPXCWQPNHFTYKFSSSNFNKCIRC 90


>UniRef50_Q1NLI0 Cluster: NADH-quinone oxidoreductase; n=3; delta
           proteobacterium MLMS-1|Rep: NADH-quinone oxidoreductase
           - delta proteobacterium MLMS-1
          Length = 208

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -1

Query: 313 APQASVSAEEREIRYS*RAMV*CNHFQVWCRVLIR*RIPKQSPQ 182
           AP+A  + E +E  +    +   NHFQ  CRV +R R+P+  PQ
Sbjct: 115 APEAEEAPEPQEDSFE--VVYDFNHFQELCRVTLRVRVPRSLPQ 156


>UniRef50_A5L2V1 Cluster: Putative uncharacterized protein; n=1;
           Vibrionales bacterium SWAT-3|Rep: Putative
           uncharacterized protein - Vibrionales bacterium SWAT-3
          Length = 343

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 20/46 (43%), Positives = 27/46 (58%)
 Frame = +3

Query: 354 LTLV*FIYNKTLFSNLRLKTFILHSYRKVPVYLFRDINETSERWLK 491
           +TLV  IYN +   +  LK++I HS   V +   +DI  TSER LK
Sbjct: 199 ITLVFLIYNFSTERDFSLKSYISHSKAHVNLEEKKDIPVTSERELK 244


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,585,113
Number of Sequences: 1657284
Number of extensions: 11462234
Number of successful extensions: 26199
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26196
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)