Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22o08
         (616 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AL023856-8|CAA19565.2|  326|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical
           protein T12A2.15a protein.
          Length = 713

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 260 GNGLMQPLPGLVQGINSITNSQ 195
           G G M  LPGL+  I S+ NSQ
Sbjct: 224 GMGEMVELPGLIDAIRSVINSQ 245


>AL023856-8|CAA19565.2|  326|Caenorhabditis elegans Hypothetical
           protein Y94A7B.3 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 4   FVVYPALVRSTRDVHKLFLLFYKFINLIIKLVFRT 108
           F VYP ++      H++F+L   F +LII+  F T
Sbjct: 164 FKVYPRILLYDTAEHRIFILAIDFYSLIIRQSFFT 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,632,961
Number of Sequences: 27780
Number of extensions: 284835
Number of successful extensions: 617
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)