Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22o04
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX248507-3|CAI18569.1| 258|Homo sapiens mitochondrial ribosomal... 127 4e-29
BX119957-6|CAM25911.1| 258|Homo sapiens mitochondrial ribosomal... 127 4e-29
BC005373-1|AAH05373.1| 258|Homo sapiens mitochondrial ribosomal... 127 4e-29
AL845353-9|CAI41878.1| 258|Homo sapiens mitochondrial ribosomal... 127 4e-29
AL732442-19|CAI17765.1| 258|Homo sapiens mitochondrial ribosoma... 127 4e-29
AL662825-11|CAI17840.1| 258|Homo sapiens mitochondrial ribosoma... 127 4e-29
AL662800-10|CAI18162.2| 258|Homo sapiens mitochondrial ribosoma... 127 4e-29
AF100761-1|AAD43025.1| 258|Homo sapiens PTD017 protein. 127 4e-29
AB202094-2|BAE78614.1| 258|Homo sapiens mitochondrial ribosomal... 127 4e-29
AB110934-1|BAD13700.1| 258|Homo sapiens MRPS18B protein protein. 127 4e-29
AB110933-1|BAD13699.1| 258|Homo sapiens MRPS18B protein protein. 127 4e-29
BX248507-2|CAM25772.1| 215|Homo sapiens mitochondrial ribosomal... 64 4e-10
BX119957-7|CAM25910.1| 215|Homo sapiens mitochondrial ribosomal... 64 4e-10
AL732442-18|CAI17764.2| 215|Homo sapiens mitochondrial ribosoma... 64 4e-10
AL662825-10|CAI17839.2| 215|Homo sapiens mitochondrial ribosoma... 64 4e-10
AL662800-11|CAI18161.2| 215|Homo sapiens mitochondrial ribosoma... 64 4e-10
BC005186-1|AAH05186.1| 142|Homo sapiens mitochondrial ribosomal... 46 1e-04
AF151892-1|AAD34129.1| 142|Homo sapiens CGI-134 protein protein. 46 1e-04
BC010364-1|AAH10364.1| 196|Homo sapiens mitochondrial ribosomal... 33 0.80
AL136131-7|CAI19964.1| 127|Homo sapiens mitochondrial ribosomal... 33 0.80
AL136131-6|CAC19510.1| 196|Homo sapiens mitochondrial ribosomal... 33 0.80
AL136131-5|CAI19963.2| 264|Homo sapiens mitochondrial ribosomal... 33 0.80
AK001410-1|BAA91675.1| 196|Homo sapiens protein ( Homo sapiens ... 33 0.80
AB049952-1|BAB41005.1| 196|Homo sapiens mitochondrial ribosomal... 33 0.80
X57813-1|CAA40950.1| 233|Homo sapiens immunoglobulin lambda lig... 31 3.2
L35916-1|AAA69776.1| 147|Homo sapiens IGLV protein. 31 4.3
AF194780-1|AAF20638.1| 108|Homo sapiens immunoglobulin lambda l... 31 4.3
BC062987-1|AAH62987.1| 395|Homo sapiens SHANK3 protein protein. 30 5.6
AK074712-1|BAC11155.1| 314|Homo sapiens protein ( Homo sapiens ... 30 5.6
AK074038-1|BAB84864.1| 770|Homo sapiens FLJ00090 protein protein. 30 5.6
AB051437-1|BAB33320.1| 797|Homo sapiens KIAA1650 protein protein. 30 5.6
DQ165859-1|ABA71607.1| 125|Homo sapiens immunoglobulin lambda c... 30 7.5
>BX248507-3|CAI18569.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 127 bits (306), Expect = 4e-29
Identities = 54/105 (51%), Positives = 72/105 (68%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 481
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+R + GNPCPICRD
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDH 111
Query: 482 YLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
L +D RN KLL+QF+ +TG I TG+C K+HK L AI++
Sbjct: 112 KLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQK 156
>BX119957-6|CAM25911.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 127 bits (306), Expect = 4e-29
Identities = 54/105 (51%), Positives = 72/105 (68%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 481
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+R + GNPCPICRD
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDH 111
Query: 482 YLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
L +D RN KLL+QF+ +TG I TG+C K+HK L AI++
Sbjct: 112 KLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQK 156
>BC005373-1|AAH05373.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 127 bits (306), Expect = 4e-29
Identities = 54/105 (51%), Positives = 72/105 (68%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 481
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+R + GNPCPICRD
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDH 111
Query: 482 YLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
L +D RN KLL+QF+ +TG I TG+C K+HK L AI++
Sbjct: 112 KLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQK 156
>AL845353-9|CAI41878.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 127 bits (306), Expect = 4e-29
Identities = 54/105 (51%), Positives = 72/105 (68%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 481
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+R + GNPCPICRD
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDH 111
Query: 482 YLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
L +D RN KLL+QF+ +TG I TG+C K+HK L AI++
Sbjct: 112 KLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQK 156
>AL732442-19|CAI17765.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 127 bits (306), Expect = 4e-29
Identities = 54/105 (51%), Positives = 72/105 (68%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 481
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+R + GNPCPICRD
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDH 111
Query: 482 YLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
L +D RN KLL+QF+ +TG I TG+C K+HK L AI++
Sbjct: 112 KLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQK 156
>AL662825-11|CAI17840.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 127 bits (306), Expect = 4e-29
Identities = 54/105 (51%), Positives = 72/105 (68%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 481
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+R + GNPCPICRD
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDH 111
Query: 482 YLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
L +D RN KLL+QF+ +TG I TG+C K+HK L AI++
Sbjct: 112 KLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQK 156
>AL662800-10|CAI18162.2| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 127 bits (306), Expect = 4e-29
Identities = 54/105 (51%), Positives = 72/105 (68%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 481
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+R + GNPCPICRD
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDH 111
Query: 482 YLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
L +D RN KLL+QF+ +TG I TG+C K+HK L AI++
Sbjct: 112 KLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQK 156
>AF100761-1|AAD43025.1| 258|Homo sapiens PTD017 protein.
Length = 258
Score = 127 bits (306), Expect = 4e-29
Identities = 54/105 (51%), Positives = 72/105 (68%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 481
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+R + GNPCPICRD
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDH 111
Query: 482 YLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
L +D RN KLL+QF+ +TG I TG+C K+HK L AI++
Sbjct: 112 KLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQK 156
>AB202094-2|BAE78614.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 127 bits (306), Expect = 4e-29
Identities = 54/105 (51%), Positives = 72/105 (68%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 481
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+R + GNPCPICRD
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDH 111
Query: 482 YLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
L +D RN KLL+QF+ +TG I TG+C K+HK L AI++
Sbjct: 112 KLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQK 156
>AB110934-1|BAD13700.1| 258|Homo sapiens MRPS18B protein protein.
Length = 258
Score = 127 bits (306), Expect = 4e-29
Identities = 54/105 (51%), Positives = 72/105 (68%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 481
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+R + GNPCPICRD
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDH 111
Query: 482 YLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
L +D RN KLL+QF+ +TG I TG+C K+HK L AI++
Sbjct: 112 KLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQK 156
>AB110933-1|BAD13699.1| 258|Homo sapiens MRPS18B protein protein.
Length = 258
Score = 127 bits (306), Expect = 4e-29
Identities = 54/105 (51%), Positives = 72/105 (68%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 481
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+R + GNPCPICRD
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDH 111
Query: 482 YLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
L +D RN KLL+QF+ +TG I TG+C K+HK L AI++
Sbjct: 112 KLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQK 156
>BX248507-2|CAM25772.1| 215|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 215
Score = 64.1 bits (149), Expect = 4e-10
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCV 430
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCI 95
>BX119957-7|CAM25910.1| 215|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 215
Score = 64.1 bits (149), Expect = 4e-10
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCV 430
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCI 95
>AL732442-18|CAI17764.2| 215|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 215
Score = 64.1 bits (149), Expect = 4e-10
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCV 430
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCI 95
>AL662825-10|CAI17839.2| 215|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 215
Score = 64.1 bits (149), Expect = 4e-10
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCV 430
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCI 95
>AL662800-11|CAI18161.2| 215|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 215
Score = 64.1 bits (149), Expect = 4e-10
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 302 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCV 430
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCI 95
>BC005186-1|AAH05186.1| 142|Homo sapiens mitochondrial ribosomal
protein S18C protein.
Length = 142
Score = 45.6 bits (103), Expect = 1e-04
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2
Query: 491 LDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
+D++N +LL QF+S +TG I TGLC KK KE+ AI+R
Sbjct: 72 VDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKR 113
>AF151892-1|AAD34129.1| 142|Homo sapiens CGI-134 protein protein.
Length = 142
Score = 45.6 bits (103), Expect = 1e-04
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2
Query: 491 LDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIER 616
+D++N +LL QF+S +TG I TGLC KK KE+ AI+R
Sbjct: 72 VDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKR 113
>BC010364-1|AAH10364.1| 196|Homo sapiens mitochondrial ribosomal
protein S18A protein.
Length = 196
Score = 33.1 bits (72), Expect = 0.80
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 461 CPICRDEYL-VLDHRNTKLLQQFISNYTGQILQPSK-TGLCQKKHKEL 598
CPICR ++ + LL QFI + G + P K TGLCQ++H+++
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGML--PRKITGLCQEEHRKI 115
>AL136131-7|CAI19964.1| 127|Homo sapiens mitochondrial ribosomal
protein S18A protein.
Length = 127
Score = 33.1 bits (72), Expect = 0.80
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 461 CPICRDEYL-VLDHRNTKLLQQFISNYTGQILQPSK-TGLCQKKHKEL 598
CPICR ++ + LL QFI + G + P K TGLCQ++H+++
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGML--PRKITGLCQEEHRKI 115
>AL136131-6|CAC19510.1| 196|Homo sapiens mitochondrial ribosomal
protein S18A protein.
Length = 196
Score = 33.1 bits (72), Expect = 0.80
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 461 CPICRDEYL-VLDHRNTKLLQQFISNYTGQILQPSK-TGLCQKKHKEL 598
CPICR ++ + LL QFI + G + P K TGLCQ++H+++
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGML--PRKITGLCQEEHRKI 115
>AL136131-5|CAI19963.2| 264|Homo sapiens mitochondrial ribosomal
protein S18A protein.
Length = 264
Score = 33.1 bits (72), Expect = 0.80
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 461 CPICRDEYL-VLDHRNTKLLQQFISNYTGQILQPSK-TGLCQKKHKEL 598
CPICR ++ + LL QFI + G + P K TGLCQ++H+++
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGML--PRKITGLCQEEHRKI 115
>AK001410-1|BAA91675.1| 196|Homo sapiens protein ( Homo sapiens
cDNA FLJ10548 fis, clone NT2RP2001969. ).
Length = 196
Score = 33.1 bits (72), Expect = 0.80
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 461 CPICRDEYL-VLDHRNTKLLQQFISNYTGQILQPSK-TGLCQKKHKEL 598
CPICR ++ + LL QFI + G + P K TGLCQ++H+++
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGML--PRKITGLCQEEHRKI 115
>AB049952-1|BAB41005.1| 196|Homo sapiens mitochondrial ribosomal
protein S18a protein.
Length = 196
Score = 33.1 bits (72), Expect = 0.80
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 461 CPICRDEYL-VLDHRNTKLLQQFISNYTGQILQPSK-TGLCQKKHKEL 598
CPICR ++ + LL QFI + G + P K TGLCQ++H+++
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGML--PRKITGLCQEEHRKI 115
>X57813-1|CAA40950.1| 233|Homo sapiens immunoglobulin lambda light
chain protein.
Length = 233
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 239 NESDEQPAVDPTKDRTKVIPVE-QSLRYLASKAYMHTYGENPVWLLYRRNHK-GGIPPR 409
+E + PAV +T I + SLR + Y H G+ P+ ++Y N++ GIP R
Sbjct: 21 SELTQDPAVSVALGQTVRITCQGDSLRAYYASWYQHKPGQAPILVIYGENNRPSGIPDR 79
>L35916-1|AAA69776.1| 147|Homo sapiens IGLV protein.
Length = 147
Score = 30.7 bits (66), Expect = 4.3
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 239 NESDEQPAVDPTKDRTKVIPVE-QSLRYLASKAYMHTYGENPVWLLYRRNHK-GGIPPR 409
+E + PAV T +T I + SLR + Y G+ P ++Y NH+ GIP R
Sbjct: 21 SELTQDPAVSVTLGQTVRITCQGDSLRTYYASWYQQKPGQAPKLVIYGNNHRPSGIPDR 79
>AF194780-1|AAF20638.1| 108|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 108
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 239 NESDEQPAVDPTKDRTKVIPVE-QSLRYLASKAYMHTYGENPVWLLYRRNHK-GGIPPR 409
+E + PAV +T I + SLR + Y G+ PV+++Y +N++ GIP R
Sbjct: 2 SELTQDPAVSVALGQTVRITCQGDSLRNFYTSWYQQKPGQAPVFVIYDKNNRPSGIPDR 60
>BC062987-1|AAH62987.1| 395|Homo sapiens SHANK3 protein protein.
Length = 395
Score = 30.3 bits (65), Expect = 5.6
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +2
Query: 218 SSTDNGPNESDEQPAVDPTKDRTKVIPVEQSLRYLASKA----YMHT-YGENPVWLLYRR 382
S+ D+G E+D + + DP + T I S+ L+S++ HT + + +LL
Sbjct: 157 SAADSGVEEADTRSSSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLL--- 213
Query: 383 NHKGGIPPRKTRKSCVRNGMISTGNP 460
K +PP+ KS + G ++ +P
Sbjct: 214 -EKPPVPPKPKLKSPLGKGPVTFRDP 238
>AK074712-1|BAC11155.1| 314|Homo sapiens protein ( Homo sapiens
cDNA FLJ90231 fis, clone NT2RM2000423, weakly similar to
BETA-GALACTOSIDASE PRECURSOR (EC 3.2.1.23). ).
Length = 314
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 137 KMALFSVLRLRLNKTLPDLRSSLRFYCSSTDNGPNESD 250
KM+ F LR K +PD FYC + GP+ D
Sbjct: 211 KMSFFERLRSATWKPVPDSHQGPAFYCGTLKAGPSPKD 248
>AK074038-1|BAB84864.1| 770|Homo sapiens FLJ00090 protein protein.
Length = 770
Score = 30.3 bits (65), Expect = 5.6
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +2
Query: 218 SSTDNGPNESDEQPAVDPTKDRTKVIPVEQSLRYLASKA----YMHT-YGENPVWLLYRR 382
S+ D+G E+D + + DP + T I S+ L+S++ HT + + +LL
Sbjct: 390 SAADSGVEEADTRSSSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLL--- 446
Query: 383 NHKGGIPPRKTRKSCVRNGMISTGNP 460
K +PP+ KS + G ++ +P
Sbjct: 447 -EKPPVPPKPKLKSPLGKGPVTFRDP 471
>AB051437-1|BAB33320.1| 797|Homo sapiens KIAA1650 protein protein.
Length = 797
Score = 30.3 bits (65), Expect = 5.6
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +2
Query: 218 SSTDNGPNESDEQPAVDPTKDRTKVIPVEQSLRYLASKA----YMHT-YGENPVWLLYRR 382
S+ D+G E+D + + DP + T I S+ L+S++ HT + + +LL
Sbjct: 417 SAADSGVEEADTRSSSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLL--- 473
Query: 383 NHKGGIPPRKTRKSCVRNGMISTGNP 460
K +PP+ KS + G ++ +P
Sbjct: 474 -EKPPVPPKPKLKSPLGKGPVTFRDP 498
>DQ165859-1|ABA71607.1| 125|Homo sapiens immunoglobulin lambda
chain variable region protein.
Length = 125
Score = 29.9 bits (64), Expect = 7.5
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 239 NESDEQPAVDPTKDRTKVIPVE-QSLRYLASKAYMHTYGENPVWLLYRRNHK-GGIPPR 409
+E + PAV +T I + SLR + Y G+ PV+++Y +N++ GIP R
Sbjct: 2 SELTQDPAVSVALGQTVRITCKGDSLRTYYASWYQQKPGQAPVFVIYGKNNRPSGIPDR 60
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,902,519
Number of Sequences: 237096
Number of extensions: 1691443
Number of successful extensions: 3438
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3427
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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