Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22o02
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728 33 0.32
07_03_1775 + 29431106-29431193,29431290-29431329,29431620-294320... 30 1.7
08_02_0317 + 15705184-15705391,15706194-15706270,15706364-157064... 29 3.0
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496... 29 3.0
02_05_0924 - 32749682-32750200,32750756-32750959,32751062-327511... 29 3.0
01_06_1520 - 37950262-37950271,37950639-37950749,37950965-379511... 29 3.0
11_06_0690 + 26303733-26306540 29 3.9
10_08_1008 - 22222051-22222377,22222479-22222640,22223179-222233... 29 3.9
05_03_0125 + 8738770-8739237,8739266-8739742 29 3.9
03_02_0674 - 10329933-10331537 29 5.2
12_02_1071 + 25824311-25824460,25824774-25824857,25825168-258252... 28 9.1
12_01_1078 - 11202284-11202343,11202941-11203000,11203036-112030... 28 9.1
09_01_0013 - 355103-355435 28 9.1
06_01_0868 - 6606913-6607000,6607516-6608010,6610313-6610761,661... 28 9.1
06_01_0486 - 3455030-3455770 28 9.1
06_01_0454 - 3234331-3236299,3237254-3238074 28 9.1
01_06_1052 + 34129126-34130490 28 9.1
>01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728
Length = 316
Score = 32.7 bits (71), Expect = 0.32
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 321 HASRHGGRA-APVPEP-SDRLRPQPRARGPSSSLYEIHAVRVEPEHHQELQ*VGREEE 488
HAS+ R+ AP PEP +D P+P A SS+ E+ EPE QE + V ++EE
Sbjct: 166 HASKSSPRSTAPKPEPVADGQHPEP-AENESSASAELEVPEPEPE--QESEPVVKQEE 220
>07_03_1775 +
29431106-29431193,29431290-29431329,29431620-29432080,
29432173-29432363,29432503-29432635,29432839-29433428
Length = 500
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +3
Query: 312 PVLHASRHGG--RAAPVPEPSDRLRPQPRARGPSSSLYEIHAVRVEPEHHQ 458
P H +RHGG RAA P PS P P P S+ + + P Q
Sbjct: 77 PPHHHNRHGGHHRAAHTPAPSPAPSPSPFTAPPKSASPAAITIPISPSTPQ 127
>08_02_0317 +
15705184-15705391,15706194-15706270,15706364-15706406,
15706507-15706564,15707576-15707645,15708409-15708876
Length = 307
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = +3
Query: 273 PNAIAAYNKHHGGPVLHASRHGGRAAPVPEPSDRLRPQPRARGPSSSLYEIHAVRVE 443
PN I++ + HG P H G A VP P AR E+H VE
Sbjct: 4 PNPISSSGQTHGNPTAHEQMELGNNAIVPSNGGNNNPNMAARQRLRWTNELHDRFVE 60
>08_01_0005 +
47929-48201,48663-48788,49009-49054,49188-49270,
49651-49728,49831-49884,50004-50138,50222-51691
Length = 754
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +1
Query: 181 PSVPPQVGYCFHSPKKHPWRPIMGYEEIEVTPMPSQPITNTMVDPCYTPAGMAAEPLRFP 360
PS+PP G SP+ P++ +T P P+ M P TPA M P FP
Sbjct: 501 PSIPP--GAPQLSPQGPSSMPVLS-SPAGLTTQPPYPLPMQMRPPMATPAQMRGPPSPFP 557
>02_05_0924 -
32749682-32750200,32750756-32750959,32751062-32751109,
32751769-32751819,32751907-32752032,32752117-32752257,
32752750-32752971,32753160-32753312,32753536-32753718,
32753964-32754110,32754212-32754319,32754426-32754530,
32754824-32754928,32755243-32755310,32755498-32755576,
32755876-32755935,32756023-32756076,32756168-32756233,
32756701-32756753,32757042-32757096,32757645-32757787,
32758236-32758333,32758436-32758716
Length = 1022
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = -1
Query: 654 GRNQAFHLDRDLVPPKR---SVCYSFANSPPGVPLSLGTNFVGFP*HP---HNVVPDSFR 493
G A++ D D V SV Y++ P GV LG N+V P P HN+ D +
Sbjct: 101 GEEVAWYADGDTVVRSEQNPSVAYAYVVLPTGVLGHLGVNYVCRPAVPVLTHNLYADLYS 160
Query: 492 KIPLRV 475
P R+
Sbjct: 161 VAPYRL 166
>01_06_1520 -
37950262-37950271,37950639-37950749,37950965-37951187,
37951291-37951525,37951641-37951772,37951865-37952230
Length = 358
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 312 PVLHASRHGGRAAPVPEPSDRLRPQPRARGPSSSLYEIHAVRV---EPEHHQELQ*VGRE 482
PV+ +S AAP S RLR P A SSS AV + P H Q VGR+
Sbjct: 13 PVVASSSSAAAAAPRRPRSLRLRVTPYASVSSSSSPSTFAVSIPPPPPARHSRKQLVGRD 72
>11_06_0690 + 26303733-26306540
Length = 935
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 324 ASRHGGRAAPVPEPSDRLRPQPRARGPSSSLYE-IHAVRVEP 446
A+ HG R + SD RP P A P++S E + A RV P
Sbjct: 4 ATAHGRRPSQADAHSDGRRPTPSAVAPAASWAEVVRAPRVGP 45
>10_08_1008 -
22222051-22222377,22222479-22222640,22223179-22223310,
22224556-22224608,22224713-22225256
Length = 405
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 300 HHGGPVLHASRHGGRAAPVPE 362
HH GP+L+A+ G AAP P+
Sbjct: 77 HHPGPMLYAAAPAGGAAPPPQ 97
>05_03_0125 + 8738770-8739237,8739266-8739742
Length = 314
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +1
Query: 520 RVLRETDEIGTQG--QRDSGRRIGERITDTTF-WRNEVSIEMERLVATCEKLSDTRRQLE 690
R L TD G G ++ RI TD WR V ++ R+ EKLS T ++E
Sbjct: 85 RTLATTDLAGVVGALRKHDSERIRGLATDIVRRWRAAVKRDLVRIGVAMEKLSQTPERIE 144
Query: 691 RA 696
A
Sbjct: 145 AA 146
>03_02_0674 - 10329933-10331537
Length = 534
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 520 RVLRETDEIGTQG--QRDSGRRIGERITDTTF-WRNEVSIEMERLVATCEKLSDTRRQLE 690
R L TD G G +R RI TD WR V E+ R+ EKLS T ++E
Sbjct: 84 RTLATTDLAGIVGALRRHESERIRGLATDIVRGWRVAVRRELVRIGIAMEKLSQTPERIE 143
>12_02_1071 +
25824311-25824460,25824774-25824857,25825168-25825246,
25825334-25825428,25825940-25826067,25826160-25826393,
25826509-25826683,25826716-25826748,25827292-25827375,
25827929-25828169,25828275-25828453,25828800-25828873,
25830800-25830950,25831178-25831252,25831748-25831778,
25832107-25832339
Length = 681
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 522 GVKGNRRNWYPRTKGLRAENWRKNNRHYVLEERGLYRDGTLG 647
G GNRR R K E W ++ R + RG RDG G
Sbjct: 574 GTGGNRRAVLGRAK--EGEKWGEDCRRNISSRRGTGRDGDWG 613
>12_01_1078 -
11202284-11202343,11202941-11203000,11203036-11203050,
11203322-11204026
Length = 279
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 208 CFHSPKKHPWRPIMGYEEIEVTPMPS 285
C HSP HP RP + EV+ PS
Sbjct: 42 CAHSPSPHPLRPSAATADEEVSLPPS 67
>09_01_0013 - 355103-355435
Length = 110
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 522 GVKGNRRNWYPRTKGLRAENWRKNNR 599
G G RR W PR + R WR R
Sbjct: 31 GAAGGRRAWRPRWRPQRRPRWRPQRR 56
>06_01_0868 -
6606913-6607000,6607516-6608010,6610313-6610761,
6610863-6610979,6611892-6612863
Length = 706
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 166 ETAGGPSVPPQVGYCFHSPKKHPWRPIMGYEEIEVTPMPSQPITNTMVDP 315
E GPS+P ++ + H+ +H + Y +V P+P + T+ DP
Sbjct: 474 EPRHGPSIP-EIQHVPHAYYRHLAPSDVPYYRSQVDPLPDRVAARTVADP 522
>06_01_0486 - 3455030-3455770
Length = 246
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +3
Query: 273 PNAIAAYNKHHGGPVLHASRHGGRAAPVPEPSDRLRPQPRARGPS 407
P + ++ HHG P S GG PE +P P R PS
Sbjct: 30 PGSGSSGGGHHGKPPGSGSGGGGHHGKPPEHHHHHKPPPSPRCPS 74
>06_01_0454 - 3234331-3236299,3237254-3238074
Length = 929
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 389 GLRSKPVTRFGNRSGSAAMPAGV*HGSTMVFVIGCDGIGVTSIS 258
G R ++R S SAA H MV ++GC G+G T+++
Sbjct: 174 GPRDDIISRLEQESSSAAAQ----HDVRMVSIVGCAGLGKTTLA 213
>01_06_1052 + 34129126-34130490
Length = 454
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +3
Query: 279 AIAAYNKHHGGPVLHASRHGGRAAPVPEPSDRLRPQPRARG 401
++ + ++H GP+ R GG A P P L A G
Sbjct: 141 SVTSIGEYHSGPLARKPRRGGTNATAPPPPPALSRSQFAAG 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,124,029
Number of Sequences: 37544
Number of extensions: 538586
Number of successful extensions: 2072
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2068
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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