Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22o02
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    26   0.43 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    25   0.76 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   4.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.3  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 12/54 (22%), Positives = 20/54 (37%)
 Frame = +1

Query: 343 EPLRFPNLVTGFDRSPEHAARAALYTRYTQYEWNQNTIKNYNESDAKRNFSERV 504
           E  R P +++       H         Y  Y +N N   NY +     N+ E++
Sbjct: 74  ERSREPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYIEQI 127


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -1

Query: 732 LDNVKRPLDAGDGSLQLSAGVAQ 664
           L NVK  LD+ +GS++++  +AQ
Sbjct: 397 LYNVKNTLDSYNGSMEINQNIAQ 419


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 226 FLVNGNNSPLVAGHWDLLLSPLLDSI 149
           F +NG +  L +G + + LSPL  ++
Sbjct: 238 FTINGESFTLQSGIFGMALSPLTQNL 263


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 454 IKNYNESDAKRN 489
           I+N+NES+ +RN
Sbjct: 366 IRNFNESENRRN 377


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,472
Number of Sequences: 438
Number of extensions: 5412
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)