BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22n23
(410 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023523-1|AAY84923.1| 288|Drosophila melanogaster IP09963p pro... 29 2.4
AE013599-898|AAM71076.1| 288|Drosophila melanogaster CG30338-PA... 29 2.4
>BT023523-1|AAY84923.1| 288|Drosophila melanogaster IP09963p
protein.
Length = 288
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 194 LRFCWLFGHHV*SKGYVRPLDRFTRKIGRTGYFELRRPDIVVI 322
L+ W++ HH+ S + L R R++ TG+ +P I+ +
Sbjct: 170 LQRIWIYSHHIKSSAKRQELIRQARQLELTGFSRPGKPGIICV 212
>AE013599-898|AAM71076.1| 288|Drosophila melanogaster CG30338-PA
protein.
Length = 288
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 194 LRFCWLFGHHV*SKGYVRPLDRFTRKIGRTGYFELRRPDIVVI 322
L+ W++ HH+ S + L R R++ TG+ +P I+ +
Sbjct: 170 LQRIWIYSHHIKSSAKRQELIRQARQLELTGFSRPGKPGIICV 212
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,599,614
Number of Sequences: 53049
Number of extensions: 352490
Number of successful extensions: 842
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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