BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22n23
(410 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical p... 28 3.0
Z46266-15|CAA86420.1| 956|Caenorhabditis elegans Hypothetical p... 28 3.0
Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical p... 28 3.0
Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical p... 28 3.0
Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical p... 28 3.0
Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical p... 28 3.0
Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical p... 28 3.0
Z46266-9|CAO78710.1| 790|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z46266-8|CAJ30221.1| 826|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z46266-4|CAA86414.2| 787|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z37979-6|CAA86038.1| 956|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical pr... 28 3.0
AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein. 28 3.0
>Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical
protein ZK899.8h protein.
Length = 1088
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 699 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 725
>Z46266-15|CAA86420.1| 956|Caenorhabditis elegans Hypothetical
protein ZK899.8f protein.
Length = 956
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 567 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 593
>Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 659 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 685
>Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 748 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 774
>Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 870 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 896
>Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical
protein ZK899.8b protein.
Length = 1170
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 781 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 807
>Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 818 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 844
>Z46266-9|CAO78710.1| 790|Caenorhabditis elegans Hypothetical
protein ZK899.8j protein.
Length = 790
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 401 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 427
>Z46266-8|CAJ30221.1| 826|Caenorhabditis elegans Hypothetical
protein ZK899.8i protein.
Length = 826
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 437 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 463
>Z46266-4|CAA86414.2| 787|Caenorhabditis elegans Hypothetical
protein ZK899.8g protein.
Length = 787
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 398 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 424
>Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical
protein ZK899.8h protein.
Length = 1088
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 699 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 725
>Z37979-6|CAA86038.1| 956|Caenorhabditis elegans Hypothetical
protein ZK899.8f protein.
Length = 956
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 567 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 593
>Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 659 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 685
>Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 748 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 774
>Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 870 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 896
>Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical
protein ZK899.8b protein.
Length = 1170
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 781 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 807
>Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 818 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 844
>Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 818 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 844
>AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein.
Length = 1120
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 234 LLQTWCPKSQQKRSQKHPVNHNVKNYLT 151
L + W P Q+K KHP++ NVK+ L+
Sbjct: 748 LEEAWTPLLQEKNGNKHPLS-NVKSVLS 774
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,330,860
Number of Sequences: 27780
Number of extensions: 191155
Number of successful extensions: 475
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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