Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22n21
         (492 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   3.1  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    22   4.1  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   4.1  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   5.4  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   9.4  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = -1

Query: 477 LLLYLFRYFTENVFTISTFYSSVLNLTNFENAEV 376
           ++L   R F + ++    +  +  N+TNF+N+ +
Sbjct: 138 IILRKKREFMQKIWPFKEYQMNGNNITNFKNSNI 171


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 75  TIPVRRQDTSVLKNELGSDYASKELSLDI 161
           T+PV R +T VLK  +   +A   L+ ++
Sbjct: 204 TVPVGRVETGVLKPGMVVTFAPAGLTTEV 232


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 75  TIPVRRQDTSVLKNELGSDYASKELSLDI 161
           T+PV R +T VLK  +   +A   L+ ++
Sbjct: 261 TVPVGRVETGVLKPGMVVTFAPAGLTTEV 289


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 75  TIPVRRQDTSVLKNELGSDYASKELSLDI 161
           T+PV R +T +LK  +   +A   L+ ++
Sbjct: 261 TVPVGRVETGILKPGMLVTFAPAALTTEV 289


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 107 DRCILSSDRNCFRIEFTA 54
           D+CILSS+    +++F A
Sbjct: 112 DKCILSSESYNPQVDFVA 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,500
Number of Sequences: 438
Number of extensions: 2042
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)