Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22n15
         (281 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    19   8.8  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    19   8.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   8.8  

>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 198 PIWCD*YPXLSLI 160
           P +CD  P LSL+
Sbjct: 55  PFFCDMSPLLSLV 67


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 48  NPYKFKTTN*RQCL 89
           NPY   TTN R+ L
Sbjct: 361 NPYPLNTTNGRKGL 374


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +2

Query: 179 YQSHQIGHFGKXGCSSETCFGKXLR 253
           + S   G+  K  CS + C G  ++
Sbjct: 27  FDSLHAGNAEKTLCSGQVCLGSVMQ 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,559
Number of Sequences: 438
Number of extensions: 1313
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)