Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22n10
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80033-4|AAC48198.2| 467|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z81047-5|CAB02832.3| 390|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC006769-11|AAF60586.1| 340|Caenorhabditis elegans Seven tm rec... 29 4.2
AC006645-4|AAF39845.2| 340|Caenorhabditis elegans Seven tm rece... 29 4.2
AC006684-6|AAF39964.1| 361|Caenorhabditis elegans Hypothetical ... 28 5.6
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 9.8
AC084155-1|AAG23361.2| 352|Caenorhabditis elegans Hypothetical ... 27 9.8
>U80033-4|AAC48198.2| 467|Caenorhabditis elegans Hypothetical
protein T23H2.4 protein.
Length = 467
Score = 31.1 bits (67), Expect = 0.79
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 86 TNMSNIDSPIALAELESVLAWVDTFKLSRPTKKINRDFSDAVLLAE--ILSVHYPKLVEM 259
+ +SN+ +PI+ S+ +W T P+K +N ++ L + L + P +++
Sbjct: 209 SKLSNVCTPISCHFRSSICSWQSTNIQLLPSKIVNEAAGESTLTSSPVRLPIDAPSFIQL 268
Query: 260 HNYPPRNS-HSLKLNNWLTLNRKVL 331
+ + S SL N ++N KV+
Sbjct: 269 QMFNSQGSVTSLSFRNIGSMNEKVI 293
>Z81047-5|CAB02832.3| 390|Caenorhabditis elegans Hypothetical
protein C41G6.7 protein.
Length = 390
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = -2
Query: 676 FDLLFEQFNRIFSILKFFLQSQIAVVVDHFLLNRLQNTIDPRLHGHNEDVFIFAASFVIA 497
+D L EQ FSIL L I + +L L I R VF+F + I+
Sbjct: 30 YDFLTEQPKTRFSILGAILDFNIFTEIVAIVLCLLHLMILFRKSLRKNGVFVFMIAICIS 89
Query: 496 TAAGYILLRLPHTLVQLFVATYFVPNH-DKYSFN 398
+ L LP+ + + Y VP H ++ +FN
Sbjct: 90 DILNF-SLALPNDSMYYKYSWYLVPMHLEQSTFN 122
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/81 (27%), Positives = 46/81 (56%)
Frame = +2
Query: 443 EELNKSMRESEQNVSSGGSYYEACGEDENILVVPVKTRVNGVLETVQQKVVNYDCYLTLK 622
+EL + + ESE+ S+ + EA + + +K + ++E ++ +++N C
Sbjct: 154 QELTEKLEESEKETSTAKTELEAVSKKLDSSETSLK-EFSDMIEAMKIQLIN--C----- 205
Query: 623 EEFKDAKDSIELLKQKVEHLD 685
E+ KD +++ELLKQK+E ++
Sbjct: 206 EKQKD--EAVELLKQKLEEVE 224
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/81 (27%), Positives = 46/81 (56%)
Frame = +2
Query: 443 EELNKSMRESEQNVSSGGSYYEACGEDENILVVPVKTRVNGVLETVQQKVVNYDCYLTLK 622
+EL + + ESE+ S+ + EA + + +K + ++E ++ +++N C
Sbjct: 154 QELTEKLEESEKETSTAKTELEAVSKKLDSSETSLK-EFSDMIEAMKIQLIN--C----- 205
Query: 623 EEFKDAKDSIELLKQKVEHLD 685
E+ KD +++ELLKQK+E ++
Sbjct: 206 EKQKD--EAVELLKQKLEEVE 224
>AC006769-11|AAF60586.1| 340|Caenorhabditis elegans Seven tm
receptor protein 154 protein.
Length = 340
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 649 RIFSILKFFLQSQIAV--VVDHFLLNRLQNTIDPRLHGHNEDVFIFAASFVIATAA 488
R FS++K Q AV VV +F+L L T PR G + + I+ + IA AA
Sbjct: 2 RTFSLIKSITQPIAAVLSVVVNFILITLVVTSSPRKMGSYKYLLIYCSGLSIAYAA 57
>AC006645-4|AAF39845.2| 340|Caenorhabditis elegans Seven tm
receptor protein 267 protein.
Length = 340
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 649 RIFSILKFFLQSQIAV--VVDHFLLNRLQNTIDPRLHGHNEDVFIFAASFVIATAA 488
R FS++K Q AV VV +F+L L T PR G + + I+ + IA AA
Sbjct: 2 RTFSLIKSITQPIAAVLSVVVNFILITLVVTSSPRKMGSYKYLLIYCSGLSIAYAA 57
>AC006684-6|AAF39964.1| 361|Caenorhabditis elegans Hypothetical
protein T02H6.5 protein.
Length = 361
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 260 HNYPPRNSHSLKLNNWLTLNRKVLKKLRLSLCCNT 364
H + PR+ + L L++WL+ L++ RL+ C+T
Sbjct: 261 HQFKPRHINQL-LHHWLSGEMPKLRRFRLNFYCDT 294
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/87 (21%), Positives = 44/87 (50%)
Frame = +2
Query: 422 RDKIRRDEELNKSMRESEQNVSSGGSYYEACGEDENILVVPVKTRVNGVLETVQQKVVNY 601
++ +++ ++L K + + N+S+ G C DENI +R + +E +++K
Sbjct: 920 KESLQKRQKLEKDIAKETANISNSGRNIAKC--DENI------SRHDKDIEKMKKKCEEL 971
Query: 602 DCYLTLKEEFKDAKDSIELLKQKVEHL 682
EE K K+++E +++++ L
Sbjct: 972 MEKAIDDEEVKSKKETVERFEKQIKKL 998
>AC084155-1|AAG23361.2| 352|Caenorhabditis elegans Hypothetical
protein Y45G5AM.6 protein.
Length = 352
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 526 KHPRCAREDEGQWCFGDGST 585
K+P C EG WC D ST
Sbjct: 122 KNPNCGSSCEGHWCHEDMST 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,235,198
Number of Sequences: 27780
Number of extensions: 248615
Number of successful extensions: 959
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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