Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22n10
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    24   1.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   2.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.7  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   8.5  

>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 596 NYDCYLTLKEEFKDAKDSIELL 661
           N+ CY +LK  F+D  +  + L
Sbjct: 14  NFSCYYSLKRHFQDKHEQSDTL 35


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = -2

Query: 595 DHFLLNRLQNTIDPRLHGHNEDVFIFAASF 506
           D+FL   LQN+++ +   +++D+  +   F
Sbjct: 280 DYFLFRSLQNSLNGKNFNNDDDIKSYLIQF 309


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +2

Query: 152 DTFKLSRPTKKINRDFSDAVLLAEILSVH 238
           +TF+ + P+KK+ +  +    LA++ +VH
Sbjct: 191 ETFEGTGPSKKLAKAAASKAALAKLRNVH 219


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 437 RDEELNKSMRESEQNVSSGG 496
           RD+E N  +  S Q  SSGG
Sbjct: 133 RDQEQNLYLTPSPQMYSSGG 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,019
Number of Sequences: 438
Number of extensions: 3023
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)