Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22m22
(678 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 53 4e-08
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 41 2e-04
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 35 0.012
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 34 0.016
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 33 0.029
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 32 0.088
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 32 0.088
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 32 0.088
SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|ch... 32 0.088
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 31 0.12
SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces pomb... 31 0.12
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 31 0.20
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 30 0.27
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 30 0.27
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 30 0.35
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 29 0.47
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 29 0.47
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 29 0.47
SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|... 29 0.47
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 29 0.62
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.82
SPBC29A3.13 |||PWWP domain protein|Schizosaccharomyces pombe|chr... 29 0.82
SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual 28 1.1
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.4
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 28 1.4
SPAC25B8.14 |mal2||kinetochore protein Mal2 |Schizosaccharomyces... 27 1.9
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 27 1.9
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 2.5
SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces p... 27 2.5
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 27 2.5
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 27 3.3
SPAPB2B4.07 |||ubiquitin family protein, human UBTD1 homolog|Sch... 27 3.3
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 26 4.4
SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosac... 26 4.4
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 26 5.8
SPAC664.08c |||traub transciption factor family protein |Schizos... 26 5.8
SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr... 26 5.8
SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps90... 26 5.8
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 25 7.6
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp... 25 7.6
SPBC21B10.12 |rec6||meiotic recombination protein Rec6|Schizosac... 25 7.6
SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr... 25 7.6
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 25 7.6
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 25 7.6
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 25 7.6
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 25 7.6
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 52.8 bits (121), Expect = 4e-08
Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 1/191 (0%)
Frame = +2
Query: 101 ITKMESDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGG 280
I+K + P S + + +D D+ +++ DN+S+S +E E + +
Sbjct: 86 ISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSD 145
Query: 281 PTSSSDVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGD-NCLS 457
+SSS + E S + + +ED D ++S + +E S+ D + S
Sbjct: 146 SSSSSSDSESESSSEGSDSSSSSSSSESESSSEDN-DSSSSSSDSESESSSEDSDSSSSS 204
Query: 458 TPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEG 637
+ +++E +S +D + S E SE+ + + +S +S SS + S + E
Sbjct: 205 SDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESES-SSEDSDSSSSSSDSES 263
Query: 638 APSVQDDESST 670
S +D +SS+
Sbjct: 264 ESSSKDSDSSS 274
Score = 49.6 bits (113), Expect = 4e-07
Identities = 40/188 (21%), Positives = 76/188 (40%)
Frame = +2
Query: 113 ESDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGPTSS 292
E + ++ S S +E S + + + +D+ + S S ++ E +++ SS
Sbjct: 124 EDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSS 183
Query: 293 SDVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADT 472
S D E + + +++ E ++S + ES+ ++ S+ +D+
Sbjct: 184 SSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDS 243
Query: 473 EENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQ 652
E S D D+ S E ES D++ S + S S +DS E E +
Sbjct: 244 ESESSSEDSDSSSSSSDSESESSSK----DSDSSSNSSDSEDDSSSDSSDSESESSSEDS 299
Query: 653 DDESSTMD 676
D SS+ D
Sbjct: 300 DSTSSSSD 307
Score = 48.8 bits (111), Expect = 7e-07
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Frame = +2
Query: 116 SDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGPTSSS 295
S ++ S+S +E S + + + +++ + DN+S+S +E E + + +SSS
Sbjct: 147 SSSSSDSESESSSEGSDSSSSSSSSESESSSE--DNDSSSSSSDSESESSSEDSDSSSSS 204
Query: 296 DVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTE 475
+ E S + + +ED D ++S + +E S+ D+ S+ +D+E
Sbjct: 205 SDSESESSSEGSDSSSSSSSSESESSSEDN-DSSSSSSDSESESSSEDSDSS-SSSSDSE 262
Query: 476 ENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSIS-SAILPTDSGVGEVEG 637
S D D+ +S E +S ++E S + S S S+ +DS +G
Sbjct: 263 SESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDG 317
Score = 41.9 bits (94), Expect = 8e-05
Identities = 38/184 (20%), Positives = 83/184 (45%)
Frame = +2
Query: 116 SDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGPTSSS 295
S ++ S+S +E S + + + +++ + D++S+S ++E E + + +SSS
Sbjct: 183 SSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSS--SSESESSSEDNDSSSSS 240
Query: 296 DVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTE 475
+ E S E ++D+E E ++ S + + +S D+ S +D+E
Sbjct: 241 SDSESESS------SEDSDSSSSSSDSESESSSKDSDSSSNSSDSE---DDSSSDSSDSE 291
Query: 476 ENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQD 655
S D D+ S + S +G + + + +S+ + + E + SV+D
Sbjct: 292 SESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSA---QSSTNSTSSEESTSVKD 348
Query: 656 DESS 667
++SS
Sbjct: 349 EDSS 352
Score = 34.7 bits (76), Expect = 0.012
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 19/159 (11%)
Frame = +2
Query: 251 EPEELAANGGPT-------------SSSDVLDVEPSIAPPAQEEHPVVEQGNADAEDEM- 388
+ ++++ G P SSSD D S + + E++ ++D+E E
Sbjct: 82 DSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDND-SSSSSSDSESESS 140
Query: 389 --DIDETASGAMNE-ESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPE--SEEAEG 553
D D ++S + +E ES+ G + S+ + +E S D D+ S E E SE+++
Sbjct: 141 SEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDS 200
Query: 554 LGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESST 670
+ +S +S SS + S E S +D++SS+
Sbjct: 201 SSSSSDSESES-SSEGSDSSSSSSSSESESSSEDNDSSS 238
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 40.7 bits (91), Expect = 2e-04
Identities = 28/121 (23%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Frame = +2
Query: 221 NNSASDDVTTEPEELAANGGPTSSSDVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDE 400
++S+S++ ++E E +++ +S + E + P ++ E +D+E + +E
Sbjct: 34 DDSSSEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEE 93
Query: 401 TASGAMNEESAYIGDNCLS---TPADTEENSPQNDQDNQLD-----SMIKEPESEEAEGL 556
T S EE + + D S + +++EE S ++ ++ + S +K+PE EEA+
Sbjct: 94 TES----EEDSEVSDESESESESESESEEESESEEESDESERSGPSSFLKKPEKEEAKPA 149
Query: 557 G 559
G
Sbjct: 150 G 150
Score = 32.3 bits (70), Expect = 0.066
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Frame = +2
Query: 233 SDDVTTEPEELAANGGPTSSSDVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASG 412
S D E + + TSS + S + EE + +E+E + +E+
Sbjct: 9 SSDSDAESVDSSEENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVE 68
Query: 413 AMNEESAYIGDNCLS-TPADTEENSPQNDQDNQL-DSMIKEPESE-EAEGLGDAEESPDQ 583
+++ ++ S + + EE ++++D+++ D E ESE E+E ++EE D+
Sbjct: 69 VPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDE 128
Query: 584 S 586
S
Sbjct: 129 S 129
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 34.7 bits (76), Expect = 0.012
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = +2
Query: 305 DVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENS 484
D P + P A EE E+ AD E E + DE G EE GD D E +
Sbjct: 165 DDAPPVQPDADEEE---EEEEAD-EMEEEFDEEGEGDEEEEEEDDGDGDGEGDGDGEGEN 220
Query: 485 PQNDQDNQLDSMIKEPESEEAEGLGD---AEESPDQ 583
+ + + I E EE L + AEE P++
Sbjct: 221 DGKGSEEEEEEEIDIEEEEEESALANASAAEEKPEE 256
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 34.3 bits (75), Expect = 0.016
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +2
Query: 392 IDETASGAMNEESAYIGDNCLSTPADTEENSP--QNDQDNQLDSMIKEPESEEAEGLGDA 565
+D+T+ +NEESAY+ + EE +P + + +L+++++E E ++ + +
Sbjct: 1051 LDQTSQ--LNEESAYLEKRIQTLERSLEEVTPIWKKQWERELNAIVQEQEFLDSHTVLIS 1108
Query: 566 EESPDQSISSAILPTDSGVGEVEGAPSVQ 652
+ D S S +L S + E++ S++
Sbjct: 1109 DLKRDLSALSTVLSNVSAIAELQAKSSIK 1137
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 33.5 bits (73), Expect = 0.029
Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 7/179 (3%)
Frame = +2
Query: 155 EVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGPTSSSDVLD-----VEPS 319
E SP A ++++ D IDD +S + P E + N SSSDV D +
Sbjct: 274 EHSPAALIKESETIDGIDDKSLRSSTREVSVESPNEDSVN--DDSSSDVSDEKETEAKHE 331
Query: 320 IAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQ 499
I PA + E D E+ + ++E S + S +DT ++ + D
Sbjct: 332 IRAPAIIVRETSSHPSTAVPSENDTTESENDTLSESSTTSISSSPSENSDTSDDLTKVDS 391
Query: 500 DNQ--LDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESST 670
N+ ++ + +E+E P Q++ + + +G + S D +S +
Sbjct: 392 PNKSLVNDNVSAKHDKESENGKSKFPPPSQTLVTTSTISAAGNEPSDEIGSENDSDSDS 450
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.9 bits (69), Expect = 0.088
Identities = 30/147 (20%), Positives = 61/147 (41%)
Frame = +2
Query: 104 TKMESDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGP 283
++ ES + S S EV + + + +++ V E ++ +++
Sbjct: 108 SESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSS 167
Query: 284 TSSSDVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTP 463
+ SS S + ++EE VVE+ E + + S + ++ S+ GD+ +
Sbjct: 168 SESSSSESESESSSSESEEEEEVVEKTEEKKEGSSE-SSSDSESSSDSSSESGDS--DSS 224
Query: 464 ADTEENSPQNDQDNQLDSMIKEPESEE 544
+D+E S D+ + EP SEE
Sbjct: 225 SDSESESSSEDEKKRK----AEPASEE 247
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 31.9 bits (69), Expect = 0.088
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Frame = +2
Query: 128 THSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDV-------TTEPEELAANGGPT 286
T SD+++ VS D + +++ I P S S D TT+P NG +
Sbjct: 109 TPSDTYNNIPVS---DTNNEEISKNIYGAPILESTSSDFQSKDSLSTTQPSVSGGNGSTS 165
Query: 287 SSSDVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDID-ETASGAMNEES 430
S LDVE + E E N+ +D D +TAS + E+S
Sbjct: 166 QSPPSLDVEQNKPFSISNEPVEQETENSSTKDLQVYDFQTASEHLPEQS 214
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 31.9 bits (69), Expect = 0.088
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +2
Query: 305 DVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENS 484
D+ + A P EQ + + EDE DID+T ++ N + + EE+
Sbjct: 213 DIANNNAAPPPPLAQAQEQLSTENEDEFDIDDT-----TDKMTTFTMNKFADLSVLEEDD 267
Query: 485 PQNDQDNQLDSMIKEPESEEAE 550
D+D +L+ KE E EE E
Sbjct: 268 DDEDEDEELEGE-KEEEEEEKE 288
>SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 274
Score = 31.9 bits (69), Expect = 0.088
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = +2
Query: 122 PATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAAN---GGPTSS 292
P+ S S+ G S + D D + +N+ + +D+ E +E A + SS
Sbjct: 178 PSRSSRSNRGFNRSSKKD--DRSFRSSSKKSSNNSISHEDLDKELDEYAMSFHAASTVSS 235
Query: 293 SDVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETA 406
D PSIA ++ PV +++ +EMD+ A
Sbjct: 236 HSSQDFTPSIANAHEKNEPVAPSKDSNLTEEMDLQMEA 273
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 31.5 bits (68), Expect = 0.12
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Frame = +2
Query: 191 VADTIDDLPDNNSASDDVTTEPEELAANG-GPTSSSDVLDVEPSIAPPAQEEHPVVEQGN 367
+ +T DL +S S V+T+ EEL + VLD E I +E+ E+
Sbjct: 11 LVETPSDLNAQDSDSLSVSTK-EELGDDALAAEEGQSVLD-EQEIEEALEEDDTNYEEDI 68
Query: 368 ADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEA 547
D E+ +DE EE + T + P+N ++ + + E++
Sbjct: 69 IDDEESAQVDEEELEEEEEEEEDATPEPVVTSKKNSRSKPKNGGASKRKASRRTVVDEDS 128
Query: 548 EGL-GDAEE 571
E L GD E+
Sbjct: 129 ENLEGDEED 137
>SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 476
Score = 31.5 bits (68), Expect = 0.12
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 14/128 (10%)
Frame = +2
Query: 143 HDGAEVSPQADNQDNQVAD--------TIDDLPDNNSASDDVTTEPEELAANGGPTSSSD 298
HD + +S D DN V + + D N++ TT + A P S
Sbjct: 216 HDSSSMSDSRDASDNDVEEYNEDGDGGSSDAATANSTRGSRRTTTKQSDKAPEQPKQESA 275
Query: 299 VLDV-----EPSIA-PPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLST 460
++D+ EPS A P P+ + + + + AS +N S ++G ST
Sbjct: 276 MIDLLGLDNEPSPAQPQTNTSAPLAFEDDGFGDFQSSAAAPASSTLNNASLFMGSQTAST 335
Query: 461 PADTEENS 484
A ++++
Sbjct: 336 AAKNDDDA 343
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 30.7 bits (66), Expect = 0.20
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 290 SSDVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIG-DNCLSTPA 466
SSDVL ++ S AQ E P VE +AEDEM + + S A NEE + D +S P
Sbjct: 853 SSDVLPMKGS----AQREVPDVEDA-IEAEDEMLEEASDSEAANEEDIDLSKDKFISVPK 907
Query: 467 DTEENSPQNDQDNQLDSMIKEPESEEA 547
++ + + + S + + A
Sbjct: 908 KPKKRTKAKAEASSSSSTSRRSRKKTA 934
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 30.3 bits (65), Expect = 0.27
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +2
Query: 329 PAQEEHPVVEQGNADAEDE-MDIDETASGAM--NEESAYIGDNCLSTPADTEENSPQ--- 490
P++EE EQ N D++DE + ID +GA+ NE+ + ++ D E P
Sbjct: 154 PSEEELQEPEQENIDSDDEDLAIDGFGAGAIAENEDESSQDESESEEEDDITEPVPSFAN 213
Query: 491 -NDQDNQLDSMIKEPESEEAE 550
+ QD DS +SEE E
Sbjct: 214 ISTQDFNSDSAAGSSDSEEDE 234
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 30.3 bits (65), Expect = 0.27
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 9/168 (5%)
Frame = +2
Query: 116 SDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGPTSSS 295
SD + + S D ++ + Q D+ + D DD +NN DD ++ G S
Sbjct: 194 SDSSNYHTSTDSSQYNDQDDHVYDDTNDGTDDDINNNEYKDD--------ESSSGSESYE 245
Query: 296 DVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETAS--GAMNEESAYIGDNCLSTPAD 469
DV+ +EE D EDE + DE S G+ N +A I + +
Sbjct: 246 RDEDVDEE-----EEEDDDENNDEGDDEDENENDELRSENGSPNPSAAVINEQENMNMSG 300
Query: 470 TEENSPQNDQDNQLDSMIKEPESEEAEGL-------GDAEESPDQSIS 592
EE D+ N L+ + + + + L G+ E S D+ +S
Sbjct: 301 IEE----YDETNLLNELGRIRRGNQFQSLASSILSSGNLENSDDEDVS 344
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 29.9 bits (64), Expect = 0.35
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 287 SSSDVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETAS-GAMNEESAYIG 442
SS+D+ +E +IAP HP + NA + +D T S G + ES +G
Sbjct: 230 SSNDITVIESTIAPQQATTHPPSQPKNAVSVPIPKMDSTDSKGELPSESLVLG 282
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 29.5 bits (63), Expect = 0.47
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Frame = +2
Query: 344 HPVVEQGNADAEDEMDIDETASG----AMNEESAYIGDNCLSTPADTEENSPQNDQDNQL 511
HP E NA+ + +DE A A N + N +T E P+N N
Sbjct: 198 HPSEELNNANTDGRTGVDEPARQLHRIAFNRIRFILAPNRSATNTPVENTHPENPDSN-- 255
Query: 512 DSMIKEPESEEAEGLGDAEESPDQSISSAILPTDS 616
+ SE G G + ++ + S P+DS
Sbjct: 256 -TSTPTTRSEPLAGEGASIDAENASSRQETTPSDS 289
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 29.5 bits (63), Expect = 0.47
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 137 DSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGPTSSSDVLDVEP 316
+S D E +P + ++ T D+L + S+D++ +L + P S +E
Sbjct: 454 ESQDYREAAPLSPTEEESRPITRDELMKKLARSEDISDNSSKLVSEPEPPIRSRCALLE- 512
Query: 317 SIAPPAQEEHP-VVEQGNADAEDEMD 391
++ PA+E P V++ D ++E D
Sbjct: 513 NMFNPAEETSPNWVQELEQDVKEECD 538
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 29.5 bits (63), Expect = 0.47
Identities = 23/104 (22%), Positives = 41/104 (39%)
Frame = +2
Query: 104 TKMESDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGP 283
TK + + HS + D + DNQ A + + +N A + +EL
Sbjct: 345 TKSTTASSGHS-TQDSLSSKMLDPSSDNQFAMSSRQMDENGMAQYPSSAIKQELNLQPQI 403
Query: 284 TSSSDVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGA 415
SS + +P++ PP H + D ++DET + +
Sbjct: 404 LVSSASKNFQPNVTPPFAVHHDHFNSTSMDGVAVSNMDETGTSS 447
>SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 162
Score = 29.5 bits (63), Expect = 0.47
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Frame = +2
Query: 284 TSSSDVLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGA--MNEESAYIGDNCLS 457
T +S +D+E I Q+E ++ A D + +E S A + + + N LS
Sbjct: 32 TDTSRYMDMENYIQKRVQDELKQLQLRQKKAIDAIQEEEWKSNAKTIKDSQGSLDSNLLS 91
Query: 458 TPADT--EENSPQND-QDNQLDSMIKEPESEEAEGLGDAEESPDQSI 589
+ E+ Q+ D +L +KE ES ++ L E PD+S+
Sbjct: 92 AEFRSFQEKLEKQSSINDKELKIKLKEVESIRSDLLKCMSEHPDKSL 138
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 29.1 bits (62), Expect = 0.62
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +2
Query: 356 EQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQND-QDNQLDSMIKEP 532
EQG+ D EDE + AS A E+ I + L++ EE P D + + +++
Sbjct: 111 EQGHVDEEDEERCRKMASDASEEKDRKIEEGELTS---EEEKEPIQDLRKSHKRKSVEKS 167
Query: 533 ESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDE 661
+ + + SP I IL D E+E S +D+E
Sbjct: 168 SVPNKKHKAERKRSPSPKIE--ILEDDE---EIEDVASDKDEE 205
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.7 bits (61), Expect = 0.82
Identities = 38/168 (22%), Positives = 72/168 (42%)
Frame = +2
Query: 173 DNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGPTSSSDVLDVEPSIAPPAQEEHPV 352
+++D Q + +++ D+ D++ + +E + P + D LD+ P ++E V
Sbjct: 4042 EDKDRQEKEDEEEMSDDVGIDDEIQPDIQENNSQP-PPENEDHLDL-PEDLKLDEKEGDV 4099
Query: 353 VEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEP 532
+ ++D ED MD++ A+ EE+ D + D E + D+D Q D
Sbjct: 4100 SK--DSDLED-MDME--AADENKEEADAEKDEPMQDFEDPLEENNTLDEDIQQDDFSDLA 4154
Query: 533 ESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMD 676
E +E EE+ ++ S T+ GV E + E +D
Sbjct: 4155 EDDEKMNEDGFEENVQENEES----TEDGVKSDEELEQGEVPEDQAID 4198
>SPBC29A3.13 |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 359
Score = 28.7 bits (61), Expect = 0.82
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 458 TPADTEENSPQNDQDNQLDSMIKEP---ESEEAEGLGDAEESPDQSISSAILPTDSGVGE 628
TP D +E S +++ + L + ++P + + +ES +SISS L + + + E
Sbjct: 139 TPPDLKEESSTDEEMDSLSAAEEKPNFLQKRKYHWETSLDESDAESISSGSLMSITSISE 198
Query: 629 VEGAPSVQDDESST 670
+ G SST
Sbjct: 199 MYGPTVASTSRSST 212
>SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 296
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 383 EMDIDETASGAMNEESAYIGDNCLSTPADTEENS 484
EMD+ +G + EES DN + P DT++N+
Sbjct: 35 EMDVQSLLTGEL-EESYTKADNSIVVPTDTQKNT 67
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 356 EQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADT 472
E+G+AD EDE D D S + + C STP T
Sbjct: 237 EEGSADEEDEEDSDVELSESSLSDDEDSPLRCPSTPVQT 275
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/83 (19%), Positives = 41/83 (49%)
Frame = +2
Query: 299 VLDVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEE 478
+++ EPS ++ +E + D+E E DE++ + E+ ++ + +
Sbjct: 57 MIECEPSCVEYFRQRKEELES-HVDSEIETSKDESSVNKVEEKVEEFKEDNVEQEIKQKR 115
Query: 479 NSPQNDQDNQLDSMIKEPESEEA 547
+ ++ Q++ L+ + K+P+ EA
Sbjct: 116 SLSESPQESMLEKVSKKPKVSEA 138
>SPAC25B8.14 |mal2||kinetochore protein Mal2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 27.5 bits (58), Expect = 1.9
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Frame = +2
Query: 356 EQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQL--DSMIKE 529
E+GNA DE+ + E + +E + + LS E S +N+ ++ + +
Sbjct: 4 EEGNATLIDEISVLEARRDVLLDELKSLDNATLSDLVQKPELSKNLSVNNEFLKETPLNQ 63
Query: 530 P--ESEEAEGLGDAE-ESPDQSISSAILPTDSGVGEVEGAPSV 649
P + G+ + P++ +L + G +E APS+
Sbjct: 64 PALHYDRLSGISFFQPNDPEELSRKTLLVKNKKTGAIETAPSI 106
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 27.5 bits (58), Expect = 1.9
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 254 PEELAANG-GPTSSSDVLDVEPSIAPPAQEE-HPVVEQGNADAEDEMDIDETASGAMNEE 427
P +A G G T + D+ P+ P+QE +EQ ++ E+E DID NE
Sbjct: 15 PNYVAGLGRGATGFTTRSDLGPAQELPSQESIKAAIEQRKSEIEEEEDIDPRYQDPDNEV 74
Query: 428 SAY 436
+ +
Sbjct: 75 ALF 77
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.1 bits (57), Expect = 2.5
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Frame = +2
Query: 134 SDSHDGAEVSPQADNQDNQVADTIDDLPDN---NSASDDVTTEPEELAANGGPTSSSDVL 304
+D + A+++ + Q + V D+ ++ P++ N D E + + N +V
Sbjct: 44 NDDSEAAKITTN-EKQSSPV-DSHNESPNDTTINKGEDGNENEVDNVNNNDKKEDEDNVE 101
Query: 305 DVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASG----AMNEESAYIGDNCLSTPADT 472
+ E +EE E D EDE D DE+ G A ++ D D
Sbjct: 102 ENEEEADANEEEE----EDEEDDEEDEEDEDESGGGRRKRARHDRRNQFLDIEAEVDEDE 157
Query: 473 EENSPQNDQDNQLDSMIKE 529
EE + D+ + D I+E
Sbjct: 158 EELEDEEDEIGREDGFIEE 176
>SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/89 (20%), Positives = 35/89 (39%)
Frame = +2
Query: 167 QADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGPTSSSDVLDVEPSIAPPAQEEH 346
+ + +D + +N +D VT E + GG + DV +IAP A+
Sbjct: 195 ELEREDFTRLKKVQKTKENAEKADSVTKEEHQ----GGSNTLQQTKDVGGAIAPAAEVGK 250
Query: 347 PVVEQGNADAEDEMDIDETASGAMNEESA 433
V+ + +D + T++ E +
Sbjct: 251 EVINEVENSKDDTYSLPSTSTDDEEENDS 279
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 27.1 bits (57), Expect = 2.5
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = +2
Query: 218 DNNSASDDVTTEPEELAANGGPTSSSDVLDVEPSIAPPAQEEHPVVEQG--NADAEDEMD 391
+++ S+ V +E E + PT+++ P+ P +E H A+A+ E
Sbjct: 272 EHSKPSETVKSEQETAVEHPKPTATTSAPSASPTGVPVEEESHKATSDAVPPAEAKPEPV 331
Query: 392 IDETASGAMNEESAYIGDNCL-STPADTEENSPQ 490
A A ES + + + ST E +P+
Sbjct: 332 PASAAERAPTSESTTVPETIVASTTKVISEPAPR 365
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 473 EENSPQNDQDNQLDSMIKEP-ESEEAEGLGDAEESPDQSISSAILPTD 613
+E+ Q + N + KE E +++E D +E+ + ISS ++P D
Sbjct: 317 KEHPIQLEDSNNSAELAKETKEEDDSENSVDKKENEEDIISSTMMPQD 364
>SPAPB2B4.07 |||ubiquitin family protein, human UBTD1
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 239
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 197 DTIDDLPDNNSASDDVTTEPEE 262
D++DD DN +S+D T PEE
Sbjct: 129 DSLDDEDDNMISSNDPTKSPEE 150
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 26.2 bits (55), Expect = 4.4
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 467 DTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPD--QSISSAILPTDSGVGEVEG- 637
DT+EN + +DSM KE E+ + + + SP+ + I + +SG+ E +
Sbjct: 1472 DTKENRATESNFSGVDSMSKERENVSS----NEDNSPEAFEDIFGILFKNESGLEEQQNL 1527
Query: 638 APSVQDDESST 670
PS Q D+ +
Sbjct: 1528 EPSSQMDKEGS 1538
>SPCC1827.02c |||cholinephosphate cytidylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 4.4
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +2
Query: 461 PADTEENSPQNDQDNQLDSMIKEPESEEA--EGLGDAEESPDQS---ISSAILPTD 613
P++ E+N + Q + + I EPE +E E D EESP +S IS ++ P +
Sbjct: 13 PSEKEDNVER--QTKKYNFEIDEPEEQEKKDEKEDDKEESPSKSLEEISQSVSPVE 66
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 25.8 bits (54), Expect = 5.8
Identities = 21/102 (20%), Positives = 42/102 (41%)
Frame = +2
Query: 125 ATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGPTSSSDVL 304
AT EVS + + + + DD P+N DV + +EL + D
Sbjct: 66 ATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNN-----DVEVDYQELLRQ-TLEADEDAS 119
Query: 305 DVEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEES 430
D + S+ + +++ ++ + +D + S + +EES
Sbjct: 120 DSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEES 161
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 5.8
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +2
Query: 113 ESDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGPTSS 292
E DP D+ E S + +N D + D+ ++ S + G TS
Sbjct: 20 ERDPEALEDAFSDREDSSEEEN-DTLGREHYVDVSESKLRSKQAPQLDPKF--KGRKTSR 76
Query: 293 SDVLD---VEPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEES 430
++L+ + + P++EE ++ +A +ED + + + +++EE+
Sbjct: 77 QELLNSGSLNSQSSSPSEEEDSEEDENDAVSEDHENFSSSEASSISEEN 125
>SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 515
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 482 SPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQ 583
S +N+ LDS E +SEE G G+ P+Q
Sbjct: 170 SERNESSLSLDSGESEKKSEEDNGNGEQNYIPEQ 203
>SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps901
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/71 (25%), Positives = 26/71 (36%)
Frame = +2
Query: 377 EDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGL 556
+DE + E G NEE I N N + D Q ++ E +EA
Sbjct: 12 KDESTVAEQRKGQSNEEKPLIDLNDSLDEQRNAYNEHCKNHDQQPSQQVRNME-DEANQY 70
Query: 557 GDAEESPDQSI 589
+ S DQ +
Sbjct: 71 EQTDSSSDQEV 81
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 107 KMESDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPE 259
K+ES + A++ DNQD + ++ + NNSA D +P+
Sbjct: 55 KLESSVGEQESATKRAKIENLKDNQDLIPNNDVNGIHINNSAVADTKHKPK 105
>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.4 bits (53), Expect = 7.6
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Frame = +2
Query: 200 TIDDLPDNNSASDDVTTEPEELAAN-GGPTSSSDVLDVEPSIAPPAQE-EHPVVEQGNAD 373
T+D++ N + S V T P LA + G P V P+ P E ++
Sbjct: 199 TLDEME-NETESGQVETTPTRLATSLGSPVLYGRVESTPPAFLPETSEKQYKRKFSFTEP 257
Query: 374 AEDEMDIDET----ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSM 520
+ +++D ET + +N+E+ N +S+ + S DQ +Q+ S+
Sbjct: 258 SSEKVDNTETKFSKKTKNINDENFPNPFNVISSYETSASPSTVIDQSSQVSSI 310
>SPBC21B10.12 |rec6||meiotic recombination protein
Rec6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 182
Score = 25.4 bits (53), Expect = 7.6
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +2
Query: 464 ADTEENSPQNDQ----DNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDS 616
AD EEN ++ D+QL +S E + EE D+ +S A++ TD+
Sbjct: 112 ADDEENKQYSESSLLDDSQLLCSSPPVDSTEEARTCNVEEDQDEILSVALVTTDT 166
>SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 178
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 104 TKMESDPAT-HSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAA 271
TK E A + ++ + E+SP DNQ+ T L +N ++ ++ E +++
Sbjct: 63 TKKELKKAKMNGNAVNSKELSPNTDNQNTPAGPTKHSLDENEKDKENKKSKKETVSS 119
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 25.4 bits (53), Expect = 7.6
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 2/152 (1%)
Frame = +2
Query: 167 QADNQDNQVADTIDDLPDNNSASDDVTTEPEELAANGGPTSSSDVLDVEPSIAPPAQEEH 346
QA NQ + A+ + SD ++++ PT DV + + P +
Sbjct: 104 QAANQKTRNAEGERKVAQRRVQSDKAEANDAAMSSSA-PTV--DVSEGNSAAEPKITPDD 160
Query: 347 PVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIK 526
+ N D D++++DE A+ +S D ST E + N ++ +K
Sbjct: 161 SDTPRLNVDMNDKINVDEAAA---KSDSKLNVDQINST--TESEKRVEKVNPNIANNPLK 215
Query: 527 EPE--SEEAEGLGDAEESPDQSISSAILPTDS 616
P+ + +E + D E+ P + SA +P S
Sbjct: 216 SPDAVAYSSETVSD-EKQPTEHPVSANVPAKS 246
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 152 AEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEP 256
A SPQ N D+Q A T +D N +T P
Sbjct: 334 ASYSPQNSNFDHQAAATTNDAHQNVVRGSAITIAP 368
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 113 ESDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDV 244
E + T ++ + E+S Q ++N +A+ DD + DD+
Sbjct: 134 EQEEKTDNEDDNDVEISTQESLENNGLAEKKDDTSSLATLEDDI 177
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 25.4 bits (53), Expect = 7.6
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 3/106 (2%)
Frame = +2
Query: 263 LAANGGPTSSSDVLDVEPSIAPPAQEEHPVVEQGNADAEDEMD--IDETASGAMNEESAY 436
+A N G ++ E PP Q H + + +D++D I+E S + EE
Sbjct: 1 MADNAGEYHDAEKHAPEQQAPPPQQPAHAAAPAQDDEPDDDIDALIEELFSEDVQEEQED 60
Query: 437 IGDNCLSTPAD-TEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEE 571
D + A E Q D + L +M + E + GL +E
Sbjct: 61 NDDAPAAGEAKAVPEELLQTDMNTGL-TMSEVEERRKKYGLNQMKE 105
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,374,459
Number of Sequences: 5004
Number of extensions: 44877
Number of successful extensions: 270
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -