Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22m16
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   5.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   5.5  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 552 SRAARKPVSIEDVWRFRPSNY*REPPRPAHQEAS-VSLSLSLDTALPSWIRN 400
           S+    P S+     F  S     P +  H E+  +S+S + DTA+PS I++
Sbjct: 402 SKEDLSPSSLSGTGPFGGSCQIHGPIQLPHSESEELSMSTAADTAVPSGIKS 453


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 552 SRAARKPVSIEDVWRFRPSNY*REPPRPAHQEAS-VSLSLSLDTALPSWIRN 400
           S+    P S+     F  S     P +  H E+  +S+S + DTA+PS I++
Sbjct: 402 SKEDLSPSSLSGTGPFGGSCQIHGPIQLPHSESEELSMSTAADTAVPSGIKS 453


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,484
Number of Sequences: 2352
Number of extensions: 14511
Number of successful extensions: 32
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)