Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22m14
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical pr...   218   3e-57
U00064-1|AAD31935.1|  845|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U23486-3|AAL38955.1|  529|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AC087079-12|AAK27874.2|  472|Caenorhabditis elegans Hypothetical...    28   5.4  
Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical
           protein ZC434.2 protein.
          Length = 194

 Score =  218 bits (532), Expect = 3e-57
 Identities = 101/176 (57%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
 Frame = +2

Query: 158 KIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 337
           K++K+ G      E  +SQAL++LETN D+++QL+ELYI   KE+EL NK +IIIYVP+P
Sbjct: 7   KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66

Query: 338 KLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRV-ANKQKRPRSRTLTSVY 514
           +LKAF KI   LVRELEKKF G+ ++ +  R+ILPKP   ++    KQKRPRSRTLT+V+
Sbjct: 67  QLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVH 126

Query: 515 NAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTG 682
           +A L++LV+PAE+VG+RIRVKLDG ++ KVHLDK+ QT + HK+  F SVY+KLTG
Sbjct: 127 DAWLDELVYPAEVVGRRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVFASVYRKLTG 182


>U00064-1|AAD31935.1|  845|Caenorhabditis elegans Hypothetical
           protein ZC155.3 protein.
          Length = 845

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +2

Query: 413 VFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILE---DLVFPAEIVGKRIRVKLD 583
           + V   ++LPK   +  +A KQ+       T+ YN IL+   + V   E     +  ++ 
Sbjct: 253 IHVRGEQVLPKRISENWIAKKQQLISGDQFTAAYNKILDEKNETVKKCEEEKALVMSEIG 312

Query: 584 GSQLIKVHL-DKNQQTTIEHKVDTFQ 658
           G+    V   D+  Q ++  +VDT Q
Sbjct: 313 GTNYTSVRREDRANQKSLRLRVDTSQ 338


>U23486-3|AAL38955.1|  529|Caenorhabditis elegans Hypothetical
           protein F07F6.4 protein.
          Length = 529

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +3

Query: 222 SNSKPTPTSKPNFGSFTLQKLKKLNYTIRSRSSSMCR 332
           S+SK T      F SF  Q ++K  YT  S SSS  R
Sbjct: 376 SSSKKTTKEDDFFDSFETQPVQKSRYTASSSSSSTSR 412


>AC087079-12|AAK27874.2|  472|Caenorhabditis elegans Hypothetical
           protein Y37E3.13 protein.
          Length = 472

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 639 CSIVVCWFLSKCTLMSCEPSNLTLMRLPTISAGKTKSSRIALYTEV 502
           C   +C F+  C ++SC      ++R      GKT+ +R  L+T+V
Sbjct: 334 CQFTICTFIGVCCVISC-----CVLRTGGGGRGKTRPNREYLHTKV 374


>Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical
           protein F45H11.3 protein.
          Length = 738

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -2

Query: 244 VGVGFEFDQRLRDRGLEGIRLSTARFDDL 158
           V VGFE   RLRD+GL   +LS   +D L
Sbjct: 522 VEVGFENWIRLRDKGLSHSQLSCQLYDTL 550


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,797,207
Number of Sequences: 27780
Number of extensions: 296762
Number of successful extensions: 853
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)