Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22m10
(620 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein. 31 2.5
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 31 2.5
BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor, argini... 31 2.5
BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor, argini... 31 2.5
BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor, argini... 31 2.5
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 31 2.5
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 31 2.5
AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant pr... 31 2.5
BC056886-1|AAH56886.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 31 4.3
BC050708-1|AAH50708.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 31 4.3
BC042625-1|AAH42625.1| 391|Homo sapiens LUC7L2 protein protein. 31 4.3
BC017163-1|AAH17163.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 31 4.3
AK022895-1|BAB14297.1| 392|Homo sapiens protein ( Homo sapiens ... 31 4.3
AK001519-1|BAA91737.1| 392|Homo sapiens protein ( Homo sapiens ... 31 4.3
AK001476-1|BAA91713.1| 392|Homo sapiens protein ( Homo sapiens ... 31 4.3
AF151832-1|AAD34069.1| 402|Homo sapiens CGI-74 protein protein. 31 4.3
AF151817-1|AAD34054.1| 383|Homo sapiens CGI-59 protein protein. 31 4.3
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 30 7.6
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 30 7.6
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 30 7.6
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 30 7.6
>U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein.
Length = 272
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWRPHKK 531
+R +S+ S+ RSR R R RK+Y + S SR R K
Sbjct: 186 SRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSK 226
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 513
+R +SKD R S KRSR+ R R R K S R
Sbjct: 346 SRSKSKDKRKSRKRSREESRSRSRSRSKSERSRKR 380
>BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWRPHKK 531
+R +S+ S+ RSR R R RK+Y + S SR R K
Sbjct: 186 SRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSK 226
>BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWRPHKK 531
+R +S+ S+ RSR R R RK+Y + S SR R K
Sbjct: 186 SRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSK 226
>BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWRPHKK 531
+R +S+ S+ RSR R R RK+Y + S SR R K
Sbjct: 186 SRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSK 226
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 513
+R +SKD R S KRSR+ R R R K S R
Sbjct: 346 SRSKSKDKRKSRKRSREESRSRSRSRSKSERSRKR 380
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 513
+R +SKD R S KRSR+ R R R K S R
Sbjct: 271 SRSKSKDKRKSRKRSREESRSRSRSRSKSERSRKR 305
>AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant
protein.
Length = 326
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWRPHKK 531
+R +S+ S+ RSR R R RK+Y + S SR R K
Sbjct: 240 SRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSK 280
>BC056886-1|AAH56886.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 519
+R S+ S++RSR + R R R+ K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341
>BC050708-1|AAH50708.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 519
+R S+ S++RSR + R R R+ K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341
>BC042625-1|AAH42625.1| 391|Homo sapiens LUC7L2 protein protein.
Length = 391
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 519
+R S+ S++RSR + R R R+ K+RSS+ R+R
Sbjct: 304 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 340
>BC017163-1|AAH17163.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 519
+R S+ S++RSR + R R R+ K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341
>AK022895-1|BAB14297.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12833 fis, clone NT2RP2003157, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 519
+R S+ S++RSR + R R R+ K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341
>AK001519-1|BAA91737.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ10657 fis, clone NT2RP2006043, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 519
+R S+ S++RSR + R R R+ K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341
>AK001476-1|BAA91713.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ10614 fis, clone NT2RP2005436, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 519
+R S+ S++RSR + R R R+ K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341
>AF151832-1|AAD34069.1| 402|Homo sapiens CGI-74 protein protein.
Length = 402
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 519
+R S+ S++RSR + R R R+ K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341
>AF151817-1|AAD34054.1| 383|Homo sapiens CGI-59 protein protein.
Length = 383
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 519
+R S+ S++RSR + R R R+ K+RSS+ R+R
Sbjct: 296 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 332
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 513
+R +SKD R KRSR+ R R R K S R
Sbjct: 346 SRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKR 380
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 513
+R +SKD R KRSR+ R R R K S R
Sbjct: 346 SRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKR 380
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 513
+R +SKD R KRSR+ R R R K S R
Sbjct: 346 SRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKR 380
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 409 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 513
+R +SKD R KRSR+ R R R K S R
Sbjct: 346 SRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKR 380
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,045,182
Number of Sequences: 237096
Number of extensions: 1732732
Number of successful extensions: 3859
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3848
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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