Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22m08
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U64839-1|AAB04844.2|  399|Caenorhabditis elegans Acyltransferase...    29   4.1  

>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical
           protein C27B7.4 protein.
          Length = 1274

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 284 IQMFISEYNNWVLGFKKNSFKSRAHVSALTGQSVNKFAIKINSIE 150
           IQ + SEY+ W+  F     + R+    L G  V  F  ++N IE
Sbjct: 325 IQNWYSEYDKWIPKFSDTGDRIRSFEVFLLGDGVKTFDQRVNLIE 369


>U64839-1|AAB04844.2|  399|Caenorhabditis elegans
           Acyltransferase-like protein 9 protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +1

Query: 229 LFFLKPRT--QLLYSLINIWIISDC*IFKYIF 318
           L FLKPR   Q+L  L+ IW+I    +  YIF
Sbjct: 47  LLFLKPRLWRQMLDRLVGIWVIMPGALCNYIF 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,323,482
Number of Sequences: 27780
Number of extensions: 271310
Number of successful extensions: 486
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)