Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22m01
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_02_0127 - 6872780-6872835,6872943-6873026,6873501-6873784,687... 32 0.56
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 29 3.0
02_05_0280 + 27435166-27435254,27436348-27436437,27436764-274368... 29 3.0
12_02_1038 - 25596027-25596393,25596492-25596660,25597283-255973... 29 3.9
08_01_0074 + 530207-532603 29 3.9
07_03_0369 - 17356806-17356934,17357145-17357278,17357989-173582... 29 3.9
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 29 3.9
01_06_0230 + 27718840-27720188,27720983-27721174,27721488-277215... 29 3.9
03_05_0275 + 22628452-22628694,22630181-22630386,22631368-226316... 29 5.2
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 29 5.2
11_06_0074 - 19821699-19823702 28 6.9
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 28 9.1
08_01_0054 - 367770-370166 28 9.1
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 28 9.1
06_03_0021 + 15520342-15520443,15522217-15522867,15522980-155231... 28 9.1
02_05_0636 + 30536717-30537022,30538836-30538952,30539026-305394... 28 9.1
>05_02_0127 -
6872780-6872835,6872943-6873026,6873501-6873784,
6874403-6874568,6876724-6876906,6877400-6877505,
6877620-6877775,6878882-6878899
Length = 350
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 345 DMFSQSSNHSLISFKNKADSQKHIVRIPLSDNTCLTTNRKVNS-VQRKN-KLNLNLITKC 518
D+ S++ H L+ ++ ++ PL D+ L+ N V R++ +L NLI +C
Sbjct: 7 DVESKAKVHPLVQGDDEIKGEQPNTDAPLGDSDSLSAASNDNKRVSREDIELVQNLIERC 66
Query: 519 NEFKMNKNTSVRQLKSESK 575
+ MN+ VR L + ++
Sbjct: 67 LQLYMNRGEVVRTLSTRAR 85
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Frame = +3
Query: 393 KADSQKHIVRIPLSDNTCLTTNR--------KVNSVQRKNKLNLNLITKCNEFKMNKNTS 548
KAD ++D CL TN ++++ KN+ + I C + + K T+
Sbjct: 3684 KADETLETSDAQVADEVCLQTNDGAHNMASGSCSTLEDKNEDSSAQIADCEDLLLRKGTT 3743
Query: 549 VRQLKSESKGHSELLTEN 602
V L +GHS L T +
Sbjct: 3744 VDDLDGCVEGHSGLSTHS 3761
>02_05_0280 +
27435166-27435254,27436348-27436437,27436764-27436866,
27437318-27437377,27437745-27439148,27439227-27439328,
27439424-27439609,27439695-27439820,27439905-27440000,
27440509-27440574
Length = 773
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 336 SFFDMFSQSSNHSLISFKNKADSQKHIVRIPLSDNTCLTTNRKVNSVQRKNKLNL 500
SF +SQSS++ S+++ HIV +P++ + + T R NS + + N+
Sbjct: 193 SFSSKYSQSSSNGFTSYESCNSMNPHIVAMPVNSKS-INTVRAFNSTGKLLQHNI 246
>12_02_1038 -
25596027-25596393,25596492-25596660,25597283-25597349,
25597617-25597794,25599157-25599228,25599311-25599717,
25600035-25600740,25600829-25600998,25601963-25602022,
25602385-25602435
Length = 748
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 72 GKQSALTRFVHPRDVKSQPSIYTFYLNTGKSDRDTDDQGVMGGVVPKSNNKNDKG 236
G S++ R + +++ S+ T YLN S + + + GG N+N G
Sbjct: 115 GATSSIIRMIRCKNIVSENCSITCYLNDSTSSKASQPIQLCGGSAESDTNQNTDG 169
>08_01_0074 + 530207-532603
Length = 798
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +3
Query: 111 DVKSQPSIYTFYLNTGKSDRDTDDQGVMGGVVPKSNNKNDKGIIVDVKEYCTTSRLTDAP 290
DV + ++ Y GK D T ++ G+V N+ + YC R+ DA
Sbjct: 485 DVITYTTLIDGYCLDGKVDEATK---LLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDAC 541
Query: 291 SIFRIATDHGTN 326
S+FR G N
Sbjct: 542 SLFRQMASKGVN 553
>07_03_0369 -
17356806-17356934,17357145-17357278,17357989-17358247,
17358322-17358410,17358644-17358794,17358889-17359032,
17359358-17359477,17359595-17359769,17359842-17360215
Length = 524
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Frame = +3
Query: 129 SIYTFYLNTGKSDRDTDDQGVMGGVVPK------SNNKNDKGIIVDVKEYCTTSRLTDAP 290
+ +T + N K+D + G +P NKN +GI +++K + + LTD
Sbjct: 224 AFFTEHPNFAKNDFYITGESYAGHYIPAFASRVYKGNKNSEGIHINLKGFAIGNGLTDPA 283
Query: 291 SIFRIATDHGTN---ITESFFDMFSQ 359
++ TD+ + IT+S F+ ++
Sbjct: 284 IQYKAYTDYSLDMGLITKSQFNRINK 309
>02_04_0481 + 23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 29.1 bits (62), Expect = 3.9
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Frame = +3
Query: 231 KGIIVDVKEYCTTSRLTDAPSIFRIATDHGTNITE-SFFDMFSQSSNHSLISFKNK--AD 401
KG+ + ++EY + A I ++ +H N TE ++ S+ +L+ NK +
Sbjct: 1403 KGMEIKIQEYQERGNMLKAKEIELLSLEHAQNTTERGMTEVISKDQLEALVEKINKLTSS 1462
Query: 402 SQKHIVR-IPLSD----------NTCLTTNRKVNSVQRKNK-LNLNLITKCNEFKM---- 533
++ H+ R + +S + +V++++ +N+ L+LNL + E +
Sbjct: 1463 AESHLQRELAMSSSPIEKLFSLIDEVYALRHEVDTLRYENEDLHLNLESHTREMEQLKEA 1522
Query: 534 NKNTSVRQLKSESKGHSELLTENAMME 614
++N+ + + ESK SELL ME
Sbjct: 1523 SRNSDSNRRELESKS-SELLEITVSME 1548
>01_06_0230 + 27718840-27720188,27720983-27721174,27721488-27721569,
27721651-27721839,27721964-27722077,27722470-27722560,
27722632-27722789,27723401-27723826,27724355-27724727,
27725075-27725238
Length = 1045
Score = 29.1 bits (62), Expect = 3.9
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Frame = +3
Query: 237 IIVDVKEY-CTTSRLTDAPSI---FRIATDHGTNITE-SFFDMFSQSS--NHSLISFKNK 395
++ DV +Y C R+ AP I F + G + S + F +S N S +S+ N
Sbjct: 870 LLEDVWDYMCQYGRVPPAPMIMERFCLKLRQGDTVAAMSCINTFQESKIRNVSSMSWFNL 929
Query: 396 ADSQKHIVRIPLSDNTCLTTNRKVNSVQRKNKLNLNLITKCNEFKMNKNTSVRQLKSESK 575
+ ++ + N V+S + L N+I+ C EF ++ +TSV + S+ +
Sbjct: 930 LNRNGDRLKEDIIIKLLHELNNLVSSSGHSDSLYQNIISSCTEF-LSVSTSVEKASSDQQ 988
>03_05_0275 +
22628452-22628694,22630181-22630386,22631368-22631659,
22632707-22632814,22632972-22633222,22633316-22633357,
22634478-22634601,22634786-22634851,22635734-22635910
Length = 502
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 534 NKNTSVRQLKSESKGHSELLTENAMMEFDPMIKMKKRYFGNILF 665
N + V L E +EL+ ENA + F P+I + + Y +LF
Sbjct: 324 NASGGVLNLGGEDDDCAELV-ENASLPFQPLISVPRDYLARLLF 366
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 28.7 bits (61), Expect = 5.2
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 9/118 (7%)
Frame = +3
Query: 252 KEYCTTSRLTDAPSIFRIATDHGTNITESFFDMFSQSSNHSLISFKN-----KADSQKHI 416
K+ +T+ L S R+ D TN S M + L F+ K +K
Sbjct: 16 KKDFSTAILERKKSPNRLVVDEATNDDNSVIGMHPDTME-KLQLFRGDTVLLKGKKRKDT 74
Query: 417 VRIPLSDNTCLTTNRKVNSVQRKN-KLNLN---LITKCNEFKMNKNTSVRQLKSESKG 578
+ I L+D+TC ++N V RKN ++ L + +C + K K + + +G
Sbjct: 75 ICIVLADDTCEEPKIRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEG 132
>11_06_0074 - 19821699-19823702
Length = 667
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +3
Query: 396 ADSQKHIVRIPLSDNTCLTTNRKVNSVQRKNKLNLNLITKCNEFK--MNKNTSVRQLKSE 569
++ QKH I S++ + T + ++ + + L T CN +K ++ NT V
Sbjct: 351 SNPQKHNFGIFRSNDVRIFTKKDISVITNNSSHLLGKSTFCNVYKGILDDNTLVAVKTYS 410
Query: 570 SKGHSELLTENAMMEFDPMIKMKKRYFGNILFHFSN 677
+ E L + M K+ RY +L H S+
Sbjct: 411 VFSYDEDLRNSISTSITIMSKIAHRYIIKLLGHCSD 446
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 27.9 bits (59), Expect = 9.1
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 9/118 (7%)
Frame = +3
Query: 252 KEYCTTSRLTDAPSIFRIATDHGTNITESFFDMFSQSSNHSLISFKN-----KADSQKHI 416
K+Y +T+ L S R+ D TN S + + L F+ K +K
Sbjct: 17 KDY-STAILERKKSPNRLVVDEATNDDNSVVALHPDTMER-LQLFRGDTVLLKGKKRKDT 74
Query: 417 VRIPLSDNTCLTTNRKVNSVQRKN-KLNLN---LITKCNEFKMNKNTSVRQLKSESKG 578
+ I L+D TC ++N V RKN ++ L + +C + K K + + +G
Sbjct: 75 ICIVLADETCEEPKIRMNKVVRKNLRVRLGDVVSVHQCQDVKYGKRVHILPIDDTVEG 132
>08_01_0054 - 367770-370166
Length = 798
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = +3
Query: 108 RDVKSQPSIYTFYLNTGKSDRDTDDQGVMGGVVPKSNNKNDKGIIVDVKEYCTTSRLTDA 287
RDV + ++ Y GK D ++ G+V N+ + YC R+ DA
Sbjct: 516 RDVITYNTLIDGYCLHGKVDEAAK---LLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDA 572
Query: 288 PSIFRIATDHGTN 326
S+FR G N
Sbjct: 573 FSLFRQMASKGVN 585
>06_03_0099 + 16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 3 EHESKESVKKTDISNQQGCDKYFGKQSALTRFVHPRDVKSQPSIYTFYLNTGKS 164
+ S SVKK+ SN Q + + Q + + S+P + +TG+S
Sbjct: 1112 DSNSNRSVKKSSSSNSQNTEGWISSQERDNEGIQKKTESSKPKDHLMKSHTGES 1165
>06_03_0021 +
15520342-15520443,15522217-15522867,15522980-15523186,
15523698-15523913,15523992-15524214,15525052-15525299,
15525385-15525563,15525803-15526056,15526237-15526388
Length = 743
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 243 VDVKEYCTTSRLTDAPSIFRIATD 314
V+ KEYC+T R +D+ I+R D
Sbjct: 437 VNTKEYCSTQRTSDSSIIWRSPVD 460
>02_05_0636 +
30536717-30537022,30538836-30538952,30539026-30539478,
30539589-30540647
Length = 644
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 72 GKQSALTRFVHPRDVKSQPSIYTFYLNTGKSDRDTDDQGVMGGVVP 209
G SAL + + +D+K+Q T LN D++ + V G +VP
Sbjct: 403 GAISALVKLLSSKDLKTQEHAVTALLNLSIYDQNKELIVVAGAIVP 448
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,560,223
Number of Sequences: 37544
Number of extensions: 305330
Number of successful extensions: 704
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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