Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22m01
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48009-6|CAA88079.1| 329|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.1
U67956-5|AAB07694.1| 724|Caenorhabditis elegans Mechanosensory ... 29 4.6
L25312-1|AAA17404.1| 724|Caenorhabditis elegans mec-10 degeneri... 29 4.6
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 28 6.1
U29378-4|AAA68727.2| 667|Caenorhabditis elegans Temporarily ass... 28 6.1
AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical ... 28 6.1
>Z48009-6|CAA88079.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.8 protein.
Length = 329
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -2
Query: 676 LLKWNKMLPKYLFFILIIGSNSIIAFSVNNSLCPLLSLFNCLTEVFLFILN 524
L+ W+ L Y + S+S+ S S+C LL+LFN +T + ++ N
Sbjct: 161 LIIWDDPLDGYQLTCISFPSDSVDRSSYFQSICTLLALFNLVTSILIWKYN 211
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +3
Query: 150 NTGKSDRDTDDQGVMGGVVPKSNNKNDK-GIIVDVKEYCTTSRLTDAPSIFRIATDHGTN 326
N G DR +G+ GG K NDK G+ VD + + +L +A IA D G +
Sbjct: 147 NPGTVDRGEFLKGIQGGFKLKKTTTNDKSGLFVDEEMRERSVKLIEAAPSSYIAPDRGRS 206
Query: 327 ITESFFDMFSQSSNHSLISFKNKADSQKHIV 419
+ S ++ + + + DS + ++
Sbjct: 207 PARPHSSLGFDSQDNRFRTPEPRDDSPEQLL 237
>U67956-5|AAB07694.1| 724|Caenorhabditis elegans Mechanosensory
abnormality protein10 protein.
Length = 724
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 567 ESKGHSELLTENAMMEFDPMIKMKKRYFGNILFHFSNYCFRSS 695
E + +LLTEN +E DP + Y I +H +C+++S
Sbjct: 66 EKEIQCDLLTENGGIEIDP---TRLSYRERIRWHLQQFCYKTS 105
>L25312-1|AAA17404.1| 724|Caenorhabditis elegans mec-10 degenerin
protein.
Length = 724
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 567 ESKGHSELLTENAMMEFDPMIKMKKRYFGNILFHFSNYCFRSS 695
E + +LLTEN +E DP + Y I +H +C+++S
Sbjct: 66 EKEIQCDLLTENGGIEIDP---TRLSYRERIRWHLQQFCYKTS 105
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 28.3 bits (60), Expect = 6.1
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +3
Query: 108 RDVKSQPSIYTFYLNTGKSDRDTDDQGVMGGVVPKSNNKNDKGII-VDVKEYCTTSRLTD 284
RD +PS ++ + N + D+ ++ V KS++ N K ++ V+ E RL
Sbjct: 866 RDDDLEPSTFS-HSNKSQQYSSKQDKTIITSVESKSDSGNKKRLMAVESPEVPKKYRL-- 922
Query: 285 APSIFRIATDHGTNITESFFDMFSQSSNHSLISFKNKADSQKHIVRIPLSDNTCLTTNRK 464
I RI + ++ E + +HS + QK + +IP+S + + + K
Sbjct: 923 ---IARIRHEGDEDVVEKPEKYSFVTDSHS--GMLEETYRQKELDQIPISSHAAVYHHGK 977
Query: 465 VNSVQRKNKLN 497
S+QR++ L+
Sbjct: 978 SWSIQRQSTLS 988
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 28.3 bits (60), Expect = 6.1
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +3
Query: 108 RDVKSQPSIYTFYLNTGKSDRDTDDQGVMGGVVPKSNNKNDKGII-VDVKEYCTTSRLTD 284
RD +PS ++ + N + D+ ++ V KS++ N K ++ V+ E RL
Sbjct: 855 RDDDLEPSTFS-HSNKSQQYSSKQDKTIITSVESKSDSGNKKRLMAVESPEVPKKYRL-- 911
Query: 285 APSIFRIATDHGTNITESFFDMFSQSSNHSLISFKNKADSQKHIVRIPLSDNTCLTTNRK 464
I RI + ++ E + +HS + QK + +IP+S + + + K
Sbjct: 912 ---IARIRHEGDEDVVEKPEKYSFVTDSHS--GMLEETYRQKELDQIPISSHAAVYHHGK 966
Query: 465 VNSVQRKNKLN 497
S+QR++ L+
Sbjct: 967 SWSIQRQSTLS 977
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 28.3 bits (60), Expect = 6.1
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +3
Query: 108 RDVKSQPSIYTFYLNTGKSDRDTDDQGVMGGVVPKSNNKNDKGII-VDVKEYCTTSRLTD 284
RD +PS ++ + N + D+ ++ V KS++ N K ++ V+ E RL
Sbjct: 855 RDDDLEPSTFS-HSNKSQQYSSKQDKTIITSVESKSDSGNKKRLMAVESPEVPKKYRL-- 911
Query: 285 APSIFRIATDHGTNITESFFDMFSQSSNHSLISFKNKADSQKHIVRIPLSDNTCLTTNRK 464
I RI + ++ E + +HS + QK + +IP+S + + + K
Sbjct: 912 ---IARIRHEGDEDVVEKPEKYSFVTDSHS--GMLEETYRQKELDQIPISSHAAVYHHGK 966
Query: 465 VNSVQRKNKLN 497
S+QR++ L+
Sbjct: 967 SWSIQRQSTLS 977
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 28.3 bits (60), Expect = 6.1
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +3
Query: 108 RDVKSQPSIYTFYLNTGKSDRDTDDQGVMGGVVPKSNNKNDKGII-VDVKEYCTTSRLTD 284
RD +PS ++ + N + D+ ++ V KS++ N K ++ V+ E RL
Sbjct: 866 RDDDLEPSTFS-HSNKSQQYSSKQDKTIITSVESKSDSGNKKRLMAVESPEVPKKYRL-- 922
Query: 285 APSIFRIATDHGTNITESFFDMFSQSSNHSLISFKNKADSQKHIVRIPLSDNTCLTTNRK 464
I RI + ++ E + +HS + QK + +IP+S + + + K
Sbjct: 923 ---IARIRHEGDEDVVEKPEKYSFVTDSHS--GMLEETYRQKELDQIPISSHAAVYHHGK 977
Query: 465 VNSVQRKNKLN 497
S+QR++ L+
Sbjct: 978 SWSIQRQSTLS 988
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 28.3 bits (60), Expect = 6.1
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +3
Query: 108 RDVKSQPSIYTFYLNTGKSDRDTDDQGVMGGVVPKSNNKNDKGII-VDVKEYCTTSRLTD 284
RD +PS ++ + N + D+ ++ V KS++ N K ++ V+ E RL
Sbjct: 855 RDDDLEPSTFS-HSNKSQQYSSKQDKTIITSVESKSDSGNKKRLMAVESPEVPKKYRL-- 911
Query: 285 APSIFRIATDHGTNITESFFDMFSQSSNHSLISFKNKADSQKHIVRIPLSDNTCLTTNRK 464
I RI + ++ E + +HS + QK + +IP+S + + + K
Sbjct: 912 ---IARIRHEGDEDVVEKPEKYSFVTDSHS--GMLEETYRQKELDQIPISSHAAVYHHGK 966
Query: 465 VNSVQRKNKLN 497
S+QR++ L+
Sbjct: 967 SWSIQRQSTLS 977
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 28.3 bits (60), Expect = 6.1
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +3
Query: 108 RDVKSQPSIYTFYLNTGKSDRDTDDQGVMGGVVPKSNNKNDKGII-VDVKEYCTTSRLTD 284
RD +PS ++ + N + D+ ++ V KS++ N K ++ V+ E RL
Sbjct: 855 RDDDLEPSTFS-HSNKSQQYSSKQDKTIITSVESKSDSGNKKRLMAVESPEVPKKYRL-- 911
Query: 285 APSIFRIATDHGTNITESFFDMFSQSSNHSLISFKNKADSQKHIVRIPLSDNTCLTTNRK 464
I RI + ++ E + +HS + QK + +IP+S + + + K
Sbjct: 912 ---IARIRHEGDEDVVEKPEKYSFVTDSHS--GMLEETYRQKELDQIPISSHAAVYHHGK 966
Query: 465 VNSVQRKNKLN 497
S+QR++ L+
Sbjct: 967 SWSIQRQSTLS 977
>U29378-4|AAA68727.2| 667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 197 protein.
Length = 667
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/72 (19%), Positives = 33/72 (45%)
Frame = +3
Query: 210 KSNNKNDKGIIVDVKEYCTTSRLTDAPSIFRIATDHGTNITESFFDMFSQSSNHSLISFK 389
+ + ND+ + E+C + P++ + A G +TES D+ ++ S S +
Sbjct: 9 QKSEANDRSFTISSLEFCLSQLRKADPNLVKKAIASGDGLTESKNDVSTRLSEAHRYSVQ 68
Query: 390 NKADSQKHIVRI 425
D+ + + ++
Sbjct: 69 QCLDNSEQLAQL 80
>AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical
protein Y57A10C.11 protein.
Length = 262
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 615 IPSSRFLLTIHYALCFHFLIASLKYFYSF*I--HXXXXXXXXXXYFYAVPNLLFCLLLNT 442
IP S L ++ F + S Y+ S + F++ P LLFC L+N
Sbjct: 145 IPKSVKLTSLQMIYTIIFFVCSQTYYISLSCMTYYPFQQEKIAIKFWS-PTLLFCPLINI 203
Query: 441 Y-YPKVEFELCV-SGNQLYF 388
+ P + +CV + N ++F
Sbjct: 204 FTLPTIHLAICVHNSNSIHF 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,783,943
Number of Sequences: 27780
Number of extensions: 323988
Number of successful extensions: 1050
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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