Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22l20
         (717 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    95   6e-22
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.54 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   1.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   6.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   6.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   6.7  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   8.8  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   8.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   8.8  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   8.8  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   8.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.8  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 95.1 bits (226), Expect = 6e-22
 Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
 Frame = +3

Query: 216 GSLARYLGIFSSHGVNLSHIESRSSTRRPGYEF--MVECEHGSGDFGAALEELKKNVGYL 389
           GSLAR L    +    ++H+ESR S ++ G +F  +V+ +         +  L+++    
Sbjct: 99  GSLARILKTIENFKGTVTHVESRPS-KKEGLQFDVLVKVDMTRQYLLQLIRNLRQSSALD 157

Query: 390 NIISRNYKDNRSAV--PWFPRRIRDLDRFANQILSYGAELDSDHPGFTDPVYRDRRKYFA 563
            +      DN  ++  PWFPR   DLD   + +  +  +LD +HPGF D  YR RRK+ A
Sbjct: 158 GVTL--LADNSVSIKDPWFPRHASDLDNCNHLMTKFEPDLDMNHPGFADKEYRARRKFIA 215

Query: 564 DIAYNYKHGEPLPYVEYTKEEVATWGVVFRE-VDRALPHSCLQ 689
           +IA+ Y++G+ +P V YT+ E  TW  VF   VD    H+C +
Sbjct: 216 EIAFAYRYGDAIPTVPYTETETETWTRVFNTLVDLVPKHACAE 258



 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 658 LTELYPTHACKEHNHVF 708
           L +L P HAC E+   F
Sbjct: 247 LVDLVPKHACAEYRRNF 263


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 51  TEKEMDITAKQIEQPTSGSPPDKP 122
           T+++  I  +Q +QP+SG+P  +P
Sbjct: 2   TQQKQPIITQQSQQPSSGAPGPQP 25


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 217 PASSGATGEIRSQVDLVESRPSRM*LPPSINFGLSGGEPDV 95
           P SS    E ++++DL+E  P R     S    LSG E DV
Sbjct: 400 PESSSNLQE-KTKIDLLEIPPIRKISDCSTTSSLSGDESDV 439


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = -3

Query: 142 LPPSINFGLSGGEPDVGCSICFAVMSISFSVAGRGVCS 29
           +PP++   L+GG  ++G  +C + +S+   +    + S
Sbjct: 91  MPPAVLLQLTGGTWELGPMLCDSWVSLDILLCTASILS 128



 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 403 ETIKIIDPLFLGSHVVSAT*IALPTRSSHTVPNWTLITL 519
           +T      ++  +H VS+      TR+ + +PNWT + L
Sbjct: 4   QTANYYGDVYQWNHTVSSG--ERDTRTEYYLPNWTDLVL 40


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 372 KNVGYLNIISRNYKDNRSAVPWFPRRIRDLDR 467
           KN  YL++I RN       + W      DL++
Sbjct: 367 KNAKYLDVIERNSGATDKIIRWCTWSEGDLEK 398


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 372 KNVGYLNIISRNYKDNRSAVPWFPRRIRDLDR 467
           KN  YL++I RN       + W      DL++
Sbjct: 367 KNAKYLDVIERNSGATDKIIRWCTWSEGDLEK 398


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 372 KNVGYLNIISRNYKDNRSAVPWFPRRIRDLDR 467
           KN  YL++I RN       + W      DL++
Sbjct: 367 KNAKYLDVIERNSGATDKIIRWCTWSEGDLEK 398


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 340 PEPCSHSTMN 311
           P PC+H+T N
Sbjct: 432 PNPCTHTTTN 441


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 340 PEPCSHSTMN 311
           P PC+H+T N
Sbjct: 418 PNPCTHTTTN 427


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 340 PEPCSHSTMN 311
           P PC+H+T N
Sbjct: 452 PNPCTHTTTN 461


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 340 PEPCSHSTMN 311
           P PC+H+T N
Sbjct: 401 PNPCTHTTTN 410


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 107 RARRGLFNLLRRDVHFFFCCW 45
           ++R+ +  +L   V  FF CW
Sbjct: 263 QSRKSVIKMLSAVVILFFICW 283


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 623  GGGHLGCSFPGS*QSSTPLM 682
            GGG  GC   G  QS  P+M
Sbjct: 967  GGGMGGCQPGGVVQSQQPIM 986


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,626
Number of Sequences: 438
Number of extensions: 5875
Number of successful extensions: 27
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)