Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22l13
(495 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 29 0.020
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 29 0.036
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 25 0.33
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 24 0.77
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 23 1.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 1.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 9.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 9.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 9.5
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 21 9.5
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 29.5 bits (63), Expect = 0.020
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 159 RIEWLLSYEYQRMWLDEREAWKKRMYPENTTVNVDIVK 272
++++ L + +++ W D R A+KKR E +V + +K
Sbjct: 54 KMDFTLDFYFRQFWTDPRLAFKKRTGVETLSVGSEFIK 91
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 28.7 bits (61), Expect = 0.036
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 162 IEWLLSYEYQRMWLDEREAWKKRMYPENTTVNVDIVK 272
+++ L + +++ W D R A+KKR E +V + +K
Sbjct: 55 MDFTLDFYFRQFWTDPRLAFKKRTGVETLSVGSEFIK 91
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 25.4 bits (53), Expect = 0.33
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 186 YQRMWLDEREAWKKRMYPENTTVNVDIVK 272
+++ W D R A+KKR E +V + +K
Sbjct: 2 FRQFWTDPRLAFKKRTGVETLSVGSEFIK 30
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 24.2 bits (50), Expect = 0.77
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 282 KHIVLQCQRLLLYFLDTYAFSMLLFHLTTCVDIHMIA 172
KHIV RL+ D Y ++LL LTT + + ++A
Sbjct: 111 KHIV----RLVTAIGDAYGVALLLHMLTTTITLTLLA 143
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 23.4 bits (48), Expect = 1.3
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -2
Query: 443 MRRFLIIFVFHISHGLII 390
M++FL+IFV+ +S +II
Sbjct: 1 MKKFLVIFVYILSVAVII 18
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.0 bits (47), Expect = 1.8
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = +3
Query: 108 LIKPSLHFKIIRNEGKSRIEWLLSYEYQRMWLDER 212
+++ +L + I ++E+ + ++ WLDER
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 20.6 bits (41), Expect = 9.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 153 KSRIEWLLSYEYQRMWLDEREAWKKR 230
+SR SY+ + + RE WK+R
Sbjct: 41 RSREREQKSYKNENSYRKYRETWKER 66
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 9.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 153 KSRIEWLLSYEYQRMWLDEREAWKKR 230
+SR SY+ + + RE WK+R
Sbjct: 41 RSREREQKSYKNENSYRKYRETWKER 66
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 9.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 153 KSRIEWLLSYEYQRMWLDEREAWKKR 230
+SR SY+ + + RE WK+R
Sbjct: 41 RSREREQKSYKNENSYRKYRETWKER 66
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 9.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 153 KSRIEWLLSYEYQRMWLDEREAWKKR 230
+SR SY+ + + RE WK+R
Sbjct: 41 RSREREQKSYKNENSYRKYRETWKER 66
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 20.6 bits (41), Expect = 9.5
Identities = 11/47 (23%), Positives = 18/47 (38%)
Frame = -1
Query: 255 LLLYFLDTYAFSMLLFHLTTCVDIHMIATIRYVIYLHFLLF*NEDSV 115
++ Y + Y F L V H++ I I + F +D V
Sbjct: 344 IVFYIISRYVFRSALEDYCNIVATHLVCGILGSILVPFFYVQEDDDV 390
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,012
Number of Sequences: 438
Number of extensions: 2544
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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