Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22l05
         (659 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49068-5|CAA88863.2|  707|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z83236-9|CAN86907.1|  140|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z49068-5|CAA88863.2|  707|Caenorhabditis elegans Hypothetical
           protein K01C8.5 protein.
          Length = 707

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 312 PAPPSLH*CPVVFHKHFRTVKKKCPDV 392
           P PPS H CP ++HK   + +++ PD+
Sbjct: 85  PPPPSSH-CPQIYHKSQYSRRERSPDI 110


>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
            protein R10F2.1 protein.
          Length = 2779

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -3

Query: 495  ILIPN--VPR*SGDIHLVITSYYQTTLHYRWVGSSFTR-PGTSFLLFENV 355
            +LI N  + + +GDI L+ T ++  T  Y  +  +FT  PGT+ L+  NV
Sbjct: 1371 LLIDNFSIDQFTGDITLIDTLHWHVTPTYNLIVEAFTSGPGTTLLVTVNV 1420


>Z83236-9|CAN86907.1|  140|Caenorhabditis elegans Hypothetical
           protein K10H10.12 protein.
          Length = 140

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 117 CYFCDNVFLWKTFGNTEIIGVLLRTLFCA 203
           C+ C+N  +   F N  II V+  TLF A
Sbjct: 104 CHTCNNKHMCNRFSNFSIIFVIFLTLFSA 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,239,424
Number of Sequences: 27780
Number of extensions: 396679
Number of successful extensions: 826
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)