Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22l05
         (659 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.9  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 224 TPVPFQSIPEVGSSLLSIFLEDPRINE 304
           T VP  S+P   +S+ SI +E   IN+
Sbjct: 852 TTVPITSLPASSTSINSITVEKDVIND 878


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 177 VLLRTLFCALRWRPTSHPFHSS 242
           V+L T  C+++W    H F  S
Sbjct: 204 VILDTARCSMKWTLIEHAFEIS 225


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 381 CPDV*KSSQPIYSVKWSG 434
           CPD   S + +Y + W G
Sbjct: 353 CPDCCPSDRMVYFITWLG 370


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 381 CPDV*KSSQPIYSVKWSG 434
           CPD   S + +Y + W G
Sbjct: 353 CPDCCPSDRMVYFITWLG 370


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 381 CPDV*KSSQPIYSVKWSG 434
           CPD   S + +Y + W G
Sbjct: 353 CPDCCPSDRMVYFITWLG 370


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 288 ILELMNELPAPPSL 329
           +LEL  ++P PP+L
Sbjct: 37  LLELAEKIPGPPAL 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,036
Number of Sequences: 438
Number of extensions: 4841
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)