Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22k23
(649 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 153 3e-38
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ... 71 1e-13
SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr 1... 29 0.44
SPCC126.10 |iah1||isoamyl acetate hydrolytic enzyme Iah1 |Schizo... 29 0.76
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 27 1.8
SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|... 27 3.1
SPBC776.05 |||membrane transporter |Schizosaccharomyces pombe|ch... 27 3.1
SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate syntha... 26 5.4
SPAC1556.08c ||SPAC1F12.01c|protein kinase activator Snf4 |Schiz... 25 7.1
SPCC11E10.06c |||RNA polymerase II elongator complex subunit Elp... 25 9.4
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 25 9.4
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 25 9.4
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 9.4
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 153 bits (370), Expect = 3e-38
Identities = 80/183 (43%), Positives = 107/183 (58%), Gaps = 2/183 (1%)
Frame = +2
Query: 107 TKDALLPGIFFALL-VRWCVAAYPYSGYRKPPMYGDFEAQRHWQEITVHTPVTTWYHNTT 283
+K P + +L+ ++W ++ PYSGY PPMYGDFEAQRHW E+T+HTPV+ WY
Sbjct: 23 SKFLFFPCLIMSLVFMQWLISIGPYSGYNTPPMYGDFEAQRHWMELTLHTPVSQWYF--- 79
Query: 284 QNDLEYWGMDYPPLSAYHSLLMGLVADW-LDPESVRLFASRGYEDDSHKTFMRWTVFLSD 460
DL++WG+DYPPL+AY S G++ + +PE SRG+E K FMR TV S
Sbjct: 80 -RDLQWWGLDYPPLTAYVSWFFGIIGHYFFNPEWFADVTSRGFESLELKLFMRSTVIASH 138
Query: 461 LYFYATAVLCICIDAERVRAKETKWVFKRTDLSTILFLLYPGLILIDHGHFQYNCVSLGL 640
L ++ R R F + S I+ L P L+LIDHGHFQYNCV LGL
Sbjct: 139 LLILVPPLMFYSKWWSR-RIPN----FVDRNASLIMVLFQPALLLIDHGHFQYNCVMLGL 193
Query: 641 FLW 649
++
Sbjct: 194 VMY 196
>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 71.3 bits (167), Expect = 1e-13
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Frame = +2
Query: 131 IFFALLVRWCVAAYPYSGYRKPPMYGDFEAQRHWQEITVHTPVTTWYHNTTQNDLEYWGM 310
++ A + V + + YR DFE R+W IT P++ WY ++ + W +
Sbjct: 7 LYNAAIASTFVKVFLFPSYRST----DFEVHRNWLAITHSLPISEWY----KSSISEWTL 58
Query: 311 DYPPLSAYHSLLMGLVADWLDPESVRLFA-SRGYEDDSHKTFMRWTVFLSDLYFYATAVL 487
DYPP AY ++ +A + + L + Y S F R +V + +L VL
Sbjct: 59 DYPPFFAYMECVLSWIAYFFGFDKAMLDPYNLNYVSPSTVVFQRGSVIVLEL------VL 112
Query: 488 CICIDAERVRAKETKWVFKRTDLSTILFLLYPGLILIDHGHFQYNCVSLGLFLW 649
+ E V + K + L+ I L PGL++IDH HFQYN GL LW
Sbjct: 113 LFAL-REYVLSSNVKDQ-RNALLTAIDIFLSPGLLIIDHIHFQYNGFLFGLLLW 164
>SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 484
Score = 29.5 bits (63), Expect = 0.44
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Frame = -3
Query: 350 PSTSYDTLITEDSPCPNIQGH---FASCY-----DTTLLPVCEQ*SLANVSELRSLHTSV 195
P T YD I E+SP P +Q + A CY LL + EQ +L N ++ + +
Sbjct: 281 PRTKYDVAIDEESPRPGLQTYEKMIAGCYLGDILRRILLDLYEQGALFNGQDVTKIRDPL 340
Query: 194 VYD 186
D
Sbjct: 341 AMD 343
>SPCC126.10 |iah1||isoamyl acetate hydrolytic enzyme Iah1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 246
Score = 28.7 bits (61), Expect = 0.76
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 459 ICISMRQQSYVYA*TRNV*ELKKQNGCSRGLI--YQLSCFYCTP 584
IC Q+ YV A + V L K S GLI Y+++ Y TP
Sbjct: 152 ICFKREQEPYVIAASETVNTLNKSKANSAGLINLYEITKSYPTP 195
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 269 YHNTTQNDLEYWGMDYPPLSAYHSLLM 349
+H D+ W +DY PL+ +H +L+
Sbjct: 957 FHIALTGDVFRWLVDYAPLNVFHHILL 983
>SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 440
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 317 DSPCPNIQGHFASCYDTTLLPVCEQ*SLANVSELRSLHTSVVYD 186
DS C N +F CYD LP+ L + SEL ++ ++D
Sbjct: 86 DSFCNNALQNFKLCYDDETLPLWMVYVLNDKSELVFIYDHSLFD 129
>SPBC776.05 |||membrane transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +2
Query: 215 EAQRHWQEITVHTPVTTWYHNTTQNDLEYWGMDYPPLSAYHSLLMGLVADWLDPESVRLF 394
E+ W I + + Y+ + EY+ D+ Y ++ LV W+ PES RLF
Sbjct: 134 ESMHLWYTIQLFVYLPLRYYTYQRKGYEYFIADF----CYWGNILLLVYIWIFPESRRLF 189
>SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 541
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 497 IDAERVRAKETKWVFKRTDLSTILFLLYPGLILIDHGHFQYNCVSL 634
I+A R ET+W+ D+ L++PG+ G+F + C SL
Sbjct: 17 INAVRYLGFETQWIRNPHDIEKAECLIFPGV-----GNFGFVCDSL 57
>SPAC1556.08c ||SPAC1F12.01c|protein kinase activator Snf4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 334
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 147 LFVGVLPHIRILDIVNHRCMETSKLR 224
+ V VL RIL ++ C ET+ LR
Sbjct: 156 MIVSVLTQYRILKFISMNCKETAMLR 181
>SPCC11E10.06c |||RNA polymerase II elongator complex subunit Elp4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 361
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 431 FMRWTVFLSDLYFYATAV--LCICIDAERVRAKETKWVFKRTDLSTILFLLYP 583
F+R+ LS L T+V +C+C + +++ + +F +L++ +F L+P
Sbjct: 225 FIRFIHTLSSLIKCTTSVHLICMCSVPSTLFSRDCEQIFWLENLASAVFSLHP 277
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.0 bits (52), Expect = 9.4
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -2
Query: 219 ASKSPYIGGLRYPEYGYA-ATHQRT--SNAKNIPGKSASFV 106
+SK P +GG+ +YG+A T QR SNA+ + K+ +
Sbjct: 806 SSKVPLLGGVTNVDYGWARCTGQRAQKSNAQLLKTKTDKII 846
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 9.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 144 YLFVGVLPHIRILDIVNHRCMETSKLRDIGKRLLFTHR*QRGIITRRKMTLNIGAWTILR 323
Y+ +GV IR+ +VN E +L + ++ Q ++ + L++ +TIL
Sbjct: 196 YILLGVF--IRVFYLVNKEKFEKKELAFLFSSIVVACLIQFNVLPLGTINLSVTRFTILC 253
Query: 324 YQRIIAC*W 350
+ +I W
Sbjct: 254 FMQIFCINW 262
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 98 TYLDRLFSSLSRLNKFFSRF*MIYIQ 21
TYL++ SSL + N+ FS F ++ Q
Sbjct: 1713 TYLNQNVSSLEKCNQIFSIFYEVFFQ 1738
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,826,280
Number of Sequences: 5004
Number of extensions: 62025
Number of successful extensions: 172
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -