Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22k23
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical pr... 162 2e-40
Z54342-12|CAA91145.2| 758|Caenorhabditis elegans Hypothetical p... 62 3e-10
Z54342-13|CAH60747.1| 123|Caenorhabditis elegans Hypothetical p... 46 2e-05
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 30 1.2
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 28 6.6
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 28 6.6
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 28 6.6
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 28 6.6
Z73911-3|CAC42339.1| 324|Caenorhabditis elegans Hypothetical pr... 27 8.7
U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alph... 27 8.7
U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alph... 27 8.7
AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeri... 27 8.7
>Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical
protein C08B11.8 protein.
Length = 503
Score = 162 bits (393), Expect = 2e-40
Identities = 77/168 (45%), Positives = 108/168 (64%)
Frame = +2
Query: 143 LLVRWCVAAYPYSGYRKPPMYGDFEAQRHWQEITVHTPVTTWYHNTTQNDLEYWGMDYPP 322
L + ++ P+SG +PPMYGD+EAQRHW EITV+ P+ WY N T NDL YWG+DYPP
Sbjct: 57 LCFQLAISLNPHSGESQPPMYGDYEAQRHWMEITVNLPIEQWYLNGTHNDLLYWGLDYPP 116
Query: 323 LSAYHSLLMGLVADWLDPESVRLFASRGYEDDSHKTFMRWTVFLSDLYFYATAVLCICID 502
++AYH L+G++++ ++ + V L SRGYE +HK FMR + + FY ++
Sbjct: 117 ITAYHHYLLGVISNKINKKWVELTTSRGYESIAHKLFMRLSAIIPFYIFYLPPLIFYF-- 174
Query: 503 AERVRAKETKWVFKRTDLSTILFLLYPGLILIDHGHFQYNCVSLGLFL 646
R+K K + + L LLYP L++ID+GHFQYN +SLGLFL
Sbjct: 175 ---TRSK------KMSPILYALALLYPSLLVIDNGHFQYNSISLGLFL 213
>Z54342-12|CAA91145.2| 758|Caenorhabditis elegans Hypothetical
protein C08H9.3a protein.
Length = 758
Score = 62.1 bits (144), Expect = 3e-10
Identities = 39/146 (26%), Positives = 57/146 (39%)
Frame = +2
Query: 209 DFEAQRHWQEITVHTPVTTWYHNTTQNDLEYWGMDYPPLSAYHSLLMGLVADWLDPESVR 388
DFE R+W +T P+ WY T W +DYPP AY L + VA + +
Sbjct: 29 DFEVHRNWMAVTWQRPLCEWYTEATSE----WTLDYPPFFAYFELGLASVAHFFGFDECL 84
Query: 389 LFASRGYEDDSHKTFMRWTVFLSDLYFYATAVLCICIDAERVRAKETKWVFKRTDLSTIL 568
+ + F R++V D+ + A L V K + +L
Sbjct: 85 VISKTPRFSRRILIFQRFSVIFCDILYIAVCALYSFRSPRLVSRIPKKLQQNGREACFVL 144
Query: 569 FLLYPGLILIDHGHFQYNCVSLGLFL 646
LI+ D HFQYN + +FL
Sbjct: 145 LASLQALIICDSIHFQYNSMLTAIFL 170
>Z54342-13|CAH60747.1| 123|Caenorhabditis elegans Hypothetical
protein C08H9.3b protein.
Length = 123
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = +2
Query: 209 DFEAQRHWQEITVHTPVTTWYHNTTQNDLEYWGMDYPPLSAYHSLLMGLVADWLDPESVR 388
DFE R+W +T P+ WY T W +DYPP AY L + VA + +
Sbjct: 29 DFEVHRNWMAVTWQRPLCEWYTEATSE----WTLDYPPFFAYFELGLASVAHFFGFDECL 84
Query: 389 LFASRGYEDDSHKTFMRWTVFLSDL 463
+ + F R++V D+
Sbjct: 85 VISKTPRFSRRILIFQRFSVIFCDI 109
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 155 WCVAAYPYSGYRK-PPMYGDFEAQRHWQEITVHTPVTTWYHNTT 283
W PYSGYR PP+Y +E + T P T TT
Sbjct: 253 WTYTVPPYSGYRTIPPVYNHYETVPPAAQTTPQPPCTPRTTTTT 296
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -2
Query: 513 TRSASMHIHRTAVA*KYKSLRNTVQRMNVL*ESSS*PLDAKSLTDSGSSQSATRPI 346
T+ ++ +HR+ ++LRN + S L++ +LT SGS+ S T P+
Sbjct: 188 TQKSTNGVHRSTSNSSAETLRNNSVSAATVSPSDDNSLNSPALTSSGSAGSGTPPL 243
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -2
Query: 513 TRSASMHIHRTAVA*KYKSLRNTVQRMNVL*ESSS*PLDAKSLTDSGSSQSATRPI 346
T+ ++ +HR+ ++LRN + S L++ +LT SGS+ S T P+
Sbjct: 159 TQKSTNGVHRSTSNSSAETLRNNSVSAATVSPSDDNSLNSPALTSSGSAGSGTPPL 214
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -2
Query: 513 TRSASMHIHRTAVA*KYKSLRNTVQRMNVL*ESSS*PLDAKSLTDSGSSQSATRPI 346
T+ ++ +HR+ ++LRN + S L++ +LT SGS+ S T P+
Sbjct: 188 TQKSTNGVHRSTSNSSAETLRNNSVSAATVSPSDDNSLNSPALTSSGSAGSGTPPL 243
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +3
Query: 132 YFSHYLFVGVLPHI-----RILDIVNHRCMETSKLRDIGKRLLFTHR*QRGIITRRKMTL 296
+ SH+ FV + + RI+D NHR + + L+D+ +L H + + K
Sbjct: 148 FISHHPFVSIFHQVLLLLKRIIDSSNHRAAQRTGLKDVVWAILTGHYNEPIVPEVMKEIK 207
Query: 297 NIGAWTIL 320
I W ++
Sbjct: 208 EIETWILM 215
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +3
Query: 132 YFSHYLFVGVLPHI-----RILDIVNHRCMETSKLRDIGKRLLFTHR*QRGIITRRKMTL 296
+ SH+ FV + + RI+D NHR + + L+D+ +L H + + K
Sbjct: 148 FISHHPFVSIFHQVLLLLKRIIDSSNHRAAQRTGLKDVVWAILTGHYNEPIVPEVMKEIK 207
Query: 297 NIGAWTIL 320
I W ++
Sbjct: 208 EIETWILM 215
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +3
Query: 132 YFSHYLFVGVLPHI-----RILDIVNHRCMETSKLRDIGKRLLFTHR*QRGIITRRKMTL 296
+ SH+ FV + + RI+D NHR + + L+D+ +L H + + K
Sbjct: 148 FISHHPFVSIFHQVLLLLKRIIDSSNHRAAQRTGLKDVVWAILTGHYNEPIVPEVMKEIK 207
Query: 297 NIGAWTIL 320
I W ++
Sbjct: 208 EIETWILM 215
>Z73911-3|CAC42339.1| 324|Caenorhabditis elegans Hypothetical
protein T12A7.7 protein.
Length = 324
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 413 DDSHKTFMRWTVFLSDLYFYATAVLCIC 496
D +KT ++ + + +FY T+VLC C
Sbjct: 115 DAKYKTLVKVAADVLNAFFYLTSVLCTC 142
>U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform a protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 443 TVFLSDLYFYATAVLCICIDAERVRAKETKWVFKRTDLSTILFLL 577
T+ ++ + F T V + ID R++ KW+ D +LF++
Sbjct: 182 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAKVVLFVI 226
>U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform b protein.
Length = 408
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 443 TVFLSDLYFYATAVLCICIDAERVRAKETKWVFKRTDLSTILFLL 577
T+ ++ + F T V + ID R++ KW+ D +LF++
Sbjct: 222 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAKVVLFVI 266
>AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 443 TVFLSDLYFYATAVLCICIDAERVRAKETKWVFKRTDLSTILFLL 577
T+ ++ + F T V + ID R++ KW+ D +LF++
Sbjct: 182 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAKVVLFVI 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,626,788
Number of Sequences: 27780
Number of extensions: 350761
Number of successful extensions: 936
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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