Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22k21
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical ... 31 0.99
AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical ... 31 0.99
Z78539-6|CAB01732.2| 134|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF043699-2|AAB97567.1| 311|Caenorhabditis elegans Ubiquitin-lik... 29 2.3
Z68114-2|CAA92158.1| 463|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF003141-8|AAK21480.1| 141|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81052-7|CAJ58492.1| 103|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z83111-6|CAB05529.2| 316|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 27 9.2
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 27 9.2
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 27 9.2
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 27 9.2
U41013-3|AAA82302.1| 433|Caenorhabditis elegans Protein kinase ... 27 9.2
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 27 9.2
>AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical
protein Y52B11A.3b protein.
Length = 516
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 88 EVAVHNKATDCWVSINGKVLDLTSWL 165
E+ HN DCWV + G V D+T +L
Sbjct: 25 ELMKHNTKDDCWVHLFGIVYDVTKYL 50
>AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical
protein Y52B11A.3a protein.
Length = 552
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 88 EVAVHNKATDCWVSINGKVLDLTSWL 165
E+ HN DCWV + G V D+T +L
Sbjct: 61 ELMKHNTKDDCWVHLFGIVYDVTKYL 86
>Z78539-6|CAB01732.2| 134|Caenorhabditis elegans Hypothetical
protein C31E10.7 protein.
Length = 134
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 79 TPAEVAVHNKATDCWVSINGKVLDLTSWLQD 171
T E+A HN W+ I KV D+T +L +
Sbjct: 8 TLKEIAEHNTNKSAWLVIGNKVFDVTKFLDE 38
>AF043699-2|AAB97567.1| 311|Caenorhabditis elegans Ubiquitin-like
protease protein 5 protein.
Length = 311
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -1
Query: 597 QTFLSFEIIIHPMH*KKVKR*FLIIINN 514
+TFL +I++ P+H K K FL+I++N
Sbjct: 119 ETFLKKDILLIPVHLDKPKHWFLVIVHN 146
>Z68114-2|CAA92158.1| 463|Caenorhabditis elegans Hypothetical
protein F17A2.3 protein.
Length = 463
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 212 LHEHALMHLQTLNSSCNQEVKSKTFPLMETQQSVALL*TATSA 84
L E +HL S N+ +KSK PL+E Q A + A+ A
Sbjct: 311 LSEPIEVHLLVDKSEVNRHIKSKEHPLLEDQNFTACIPEASPA 353
>AF003141-8|AAK21480.1| 141|Caenorhabditis elegans Hypothetical
protein W02D3.1 protein.
Length = 141
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +1
Query: 88 EVAVHN---KATDCWVSINGKVLDLTSWLQD 171
EV+ HN CW+ I+GKV D+T +L +
Sbjct: 11 EVSKHNWEDADQSCWIVISGKVYDVTKFLNE 41
>Z81052-7|CAJ58492.1| 103|Caenorhabditis elegans Hypothetical
protein D2023.1b protein.
Length = 103
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 79 TPAEVAVHNKATDCWVSINGKVLDLTSWL 165
T +EV +H DCW+ + V D+T ++
Sbjct: 7 TRSEVNMHCSEDDCWIIVGNYVYDVTKFV 35
>Z83111-6|CAB05529.2| 316|Caenorhabditis elegans Hypothetical
protein F57G8.8 protein.
Length = 316
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = -1
Query: 414 CVHIIHITDCTAQTLVSNLYLCIYSFRHDVHF*RSLSEDPLSVTIREPSLEARAGFHAII 235
C+H++ + +A T ++ IYS + DV D SV +++ L A ++ ++
Sbjct: 211 CIHVLFLAIISAATFAYYVFQAIYSDQLDVGDVSLPDSDSKSVNLQQEDLRALRVWYPLV 270
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 264 QARVPVL*QKEDPPKDFFRNERHDENCKCKDKDCS 368
Q V V +KED PK R E+ N K +D CS
Sbjct: 1121 QEEVQVRSEKEDSPKTSKRAEKSARNIKQQDSLCS 1155
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 264 QARVPVL*QKEDPPKDFFRNERHDENCKCKDKDCS 368
Q V V +KED PK R E+ N K +D CS
Sbjct: 1121 QEEVQVRSEKEDSPKTSKRAEKSARNIKQQDSLCS 1155
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 264 QARVPVL*QKEDPPKDFFRNERHDENCKCKDKDCS 368
Q V V +KED PK R E+ N K +D CS
Sbjct: 1121 QEEVQVRSEKEDSPKTSKRAEKSARNIKQQDSLCS 1155
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical protein
F31B12.1c protein.
Length = 1895
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 264 QARVPVL*QKEDPPKDFFRNERHDENCKCKDKDCS 368
Q V V +KED PK R E+ N K +D CS
Sbjct: 1121 QEEVQVRSEKEDSPKTSKRAEKSARNIKQQDSLCS 1155
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical protein
F31B12.1b protein.
Length = 1868
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 264 QARVPVL*QKEDPPKDFFRNERHDENCKCKDKDCS 368
Q V V +KED PK R E+ N K +D CS
Sbjct: 1121 QEEVQVRSEKEDSPKTSKRAEKSARNIKQQDSLCS 1155
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical protein
F31B12.1a protein.
Length = 1898
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 264 QARVPVL*QKEDPPKDFFRNERHDENCKCKDKDCS 368
Q V V +KED PK R E+ N K +D CS
Sbjct: 1121 QEEVQVRSEKEDSPKTSKRAEKSARNIKQQDSLCS 1155
>U41013-3|AAA82302.1| 433|Caenorhabditis elegans Protein kinase
protein 26 protein.
Length = 433
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -2
Query: 272 PRLKQGQVSTQSSSQYQFLILHEHALMHLQTLNSSCNQE 156
P +K V+TQ ++ Y+ + + HA +QT+ + CN E
Sbjct: 331 PGMKPADVATQVANGYR-MPPYPHAQAEIQTMMARCNAE 368
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 264 QARVPVL*QKEDPPKDFFRNERHDENCKCKDKDCS 368
Q V V +KED PK R E+ N K +D CS
Sbjct: 1121 QEEVQVRSEKEDSPKTSKRAEKSARNIKQQDSLCS 1155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,692,492
Number of Sequences: 27780
Number of extensions: 265849
Number of successful extensions: 772
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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