Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22k21
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    28   0.093
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    28   0.093
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    28   0.093
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    27   0.12 
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    26   0.38 
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    24   1.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.1  

>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -3

Query: 649 ELQMSRQSK*VES---STLHSNISQF*NYNSSNALKKSKKVIFN 527
           E + SR+ K + S    T+H+N +   NYN++N     KK+ +N
Sbjct: 72  ERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYN 115


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -3

Query: 649 ELQMSRQSK*VES---STLHSNISQF*NYNSSNALKKSKKVIFN 527
           E + SR+ K + S    T+H+N +   NYN++N     KK+ +N
Sbjct: 72  ERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYN 115


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -3

Query: 649 ELQMSRQSK*VES---STLHSNISQF*NYNSSNALKKSKKVIFN 527
           E + SR+ K + S    T+H+N +   NYN++N     KK+ +N
Sbjct: 72  ERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYN 115


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -3

Query: 649 ELQMSRQSK*VES---STLHSNISQF*NYNSSNALKKSKKVIFN 527
           E + SR+ K + S    T+H+N +   NYN++N     KK+ +N
Sbjct: 72  ERERSREPKIISSLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYN 115


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = -3

Query: 649 ELQMSRQSK*VESST---LHSNISQF*NYNSSNALKKSKKVIFNNH 521
           E + S++ K + S +    +SN + + NYN++N    +KK+ + N+
Sbjct: 305 ERERSKEPKIISSLSNNYKYSNYNNYNNYNNNNYNNYNKKLYYKNY 350


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -3

Query: 649 ELQMSRQSK*VES---STLHSNISQF*NYNSSNALKKSKKVIFNNH 521
           E + SR+ K + S    T+H+N +   NYN++N    +    +NN+
Sbjct: 305 ERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNN 350


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 651 VSYKCQDKASEWKVVHFTQTFLSFEI 574
           ++  C DK + W V+      LS+ I
Sbjct: 431 LTMSCSDKIARWNVLGVQGALLSYFI 456


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 367 HKRLSCAISDVNNVNTSERSDCF 435
           HK    +I++ NN NT++  D +
Sbjct: 127 HKWFQMSINNTNNNNTNKYKDYY 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,589
Number of Sequences: 438
Number of extensions: 3159
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)