Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22k18
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC087845-1|AAH87845.1| 300|Homo sapiens chromosome 18 open read... 81 4e-15
BC015178-1|AAH15178.2| 300|Homo sapiens chromosome 18 open read... 81 4e-15
AY598336-1|AAT06747.1| 240|Homo sapiens L17 protein. 81 4e-15
AB073382-1|BAD38633.1| 257|Homo sapiens putative protein produc... 81 4e-15
BC022199-1|AAH22199.2| 167|Homo sapiens C18orf10 protein protein. 75 2e-13
>BC087845-1|AAH87845.1| 300|Homo sapiens chromosome 18 open reading
frame 10 protein.
Length = 300
Score = 81.0 bits (191), Expect = 4e-15
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Frame = +2
Query: 413 RPVLNTKSKVFELDICRYIGKVCLVYTGGS------WSIWLATREGAWGWLADSFTHYFR 574
+P +++S +FELD C GKVCLVY G IW R W +L D+FT Y+R
Sbjct: 135 KPHFDSRSVIFELDSCNGSGKVCLVYKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYR 194
Query: 575 MALVHLGLPGWQAAFANLPMIPWAEQLFXLLAP 673
+ + HLGLP WQ AF + + P A+Q F + P
Sbjct: 195 LLITHLGLPQWQYAFTSYGISPQAKQWFSMYKP 227
Score = 74.5 bits (175), Expect = 3e-13
Identities = 27/62 (43%), Positives = 47/62 (75%)
Frame = +1
Query: 103 ENITLGVTKLLESDPRICNVSVERRAPCDRVALSNWEQRHSAVLPEDLRNFYGSSDGFQL 282
E +TLG+T++LES P + V++ + P +R +S+WEQ+++ V+PED++NFY ++GF +
Sbjct: 18 EKLTLGITRILESSPGVTEVTIIEKPPAERHMISSWEQKNNCVMPEDVKNFYLMTNGFHM 77
Query: 283 TW 288
TW
Sbjct: 78 TW 79
>BC015178-1|AAH15178.2| 300|Homo sapiens chromosome 18 open reading
frame 10 protein.
Length = 300
Score = 81.0 bits (191), Expect = 4e-15
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Frame = +2
Query: 413 RPVLNTKSKVFELDICRYIGKVCLVYTGGS------WSIWLATREGAWGWLADSFTHYFR 574
+P +++S +FELD C GKVCLVY G IW R W +L D+FT Y+R
Sbjct: 135 KPHFDSRSVIFELDSCNGSGKVCLVYKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYR 194
Query: 575 MALVHLGLPGWQAAFANLPMIPWAEQLFXLLAP 673
+ + HLGLP WQ AF + + P A+Q F + P
Sbjct: 195 LLITHLGLPQWQYAFTSYGISPQAKQWFSMYKP 227
Score = 74.5 bits (175), Expect = 3e-13
Identities = 27/62 (43%), Positives = 47/62 (75%)
Frame = +1
Query: 103 ENITLGVTKLLESDPRICNVSVERRAPCDRVALSNWEQRHSAVLPEDLRNFYGSSDGFQL 282
E +TLG+T++LES P + V++ + P +R +S+WEQ+++ V+PED++NFY ++GF +
Sbjct: 18 EKLTLGITRILESSPGVTEVTIIEKPPAERHMISSWEQKNNCVMPEDVKNFYLMTNGFHM 77
Query: 283 TW 288
TW
Sbjct: 78 TW 79
>AY598336-1|AAT06747.1| 240|Homo sapiens L17 protein.
Length = 240
Score = 81.0 bits (191), Expect = 4e-15
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Frame = +2
Query: 413 RPVLNTKSKVFELDICRYIGKVCLVYTGGS------WSIWLATREGAWGWLADSFTHYFR 574
+P +++S +FELD C GKVCLVY G IW R W +L D+FT Y+R
Sbjct: 75 KPHFDSRSVIFELDSCNGSGKVCLVYKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYR 134
Query: 575 MALVHLGLPGWQAAFANLPMIPWAEQLFXLLAP 673
+ + HLGLP WQ AF + + P A+Q F + P
Sbjct: 135 LLITHLGLPQWQYAFTSYGISPQAKQWFSMYKP 167
Score = 31.9 bits (69), Expect = 2.2
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +1
Query: 232 LPEDLRNFYGSSDGFQLTW 288
+PED++NFY ++GF +TW
Sbjct: 1 MPEDVKNFYLMTNGFHMTW 19
>AB073382-1|BAD38633.1| 257|Homo sapiens putative protein product
of HMFN0601 protein.
Length = 257
Score = 81.0 bits (191), Expect = 4e-15
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Frame = +2
Query: 413 RPVLNTKSKVFELDICRYIGKVCLVYTGGS------WSIWLATREGAWGWLADSFTHYFR 574
+P +++S +FELD C GKVCLVY G IW R W +L D+FT Y+R
Sbjct: 92 KPHFDSRSVIFELDSCNGSGKVCLVYKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYR 151
Query: 575 MALVHLGLPGWQAAFANLPMIPWAEQLFXLLAP 673
+ + HLGLP WQ AF + + P A+Q F + P
Sbjct: 152 LLITHLGLPQWQYAFTSYGISPQAKQWFSMYKP 184
Score = 74.5 bits (175), Expect = 3e-13
Identities = 27/62 (43%), Positives = 47/62 (75%)
Frame = +1
Query: 103 ENITLGVTKLLESDPRICNVSVERRAPCDRVALSNWEQRHSAVLPEDLRNFYGSSDGFQL 282
E +TLG+T++LES P + V++ + P +R +S+WEQ+++ V+PED++NFY ++GF +
Sbjct: 18 EKLTLGITRILESSPGVTEVTIIEKPPAERHMISSWEQKNNCVMPEDVKNFYLMTNGFHM 77
Query: 283 TW 288
TW
Sbjct: 78 TW 79
>BC022199-1|AAH22199.2| 167|Homo sapiens C18orf10 protein protein.
Length = 167
Score = 74.9 bits (176), Expect = 2e-13
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Frame = +2
Query: 413 RPVLNTKSKVFELDICRYIGKVCLVYTGGS------WSIWLATREGAWGWLADSFTHYFR 574
+P +++S +FELD C GKVCLVY G IW R W +L D+FT Y+R
Sbjct: 75 KPHFDSRSVIFELDSCNGSGKVCLVYKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYR 134
Query: 575 MALVHLGLPGWQAAFANLPMIPWAE 649
+ + HLGLP WQ AF + + P A+
Sbjct: 135 LLITHLGLPQWQYAFTSYGISPQAK 159
Score = 31.9 bits (69), Expect = 2.2
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +1
Query: 232 LPEDLRNFYGSSDGFQLTW 288
+PED++NFY ++GF +TW
Sbjct: 1 MPEDVKNFYLMTNGFHMTW 19
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,427,467
Number of Sequences: 237096
Number of extensions: 2015690
Number of successful extensions: 3313
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3308
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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