Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22k10
         (751 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.3  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 299 VHAQSTNEEVILEVYLETDMNR 364
           VH++  N   ++  Y +TD+N+
Sbjct: 90  VHSRDVNVRAVVAQYYDTDVNK 111


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 206 MRRTI-EEKRVNTSVDRDLESVQSQATNQNTQVHAQS 313
           MRR + E+KR++ SV+ D      Q  + +   H Q+
Sbjct: 788 MRRLMSEDKRLSKSVNGDQSQPPHQQLHHHQSTHPQA 824


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 663 PVMYGWHVFFD 631
           P+ Y WH F D
Sbjct: 399 PIFYRWHAFVD 409


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 527 ILKTLKQKWKRPSKLQ 574
           ILK LKQK+ + SKL+
Sbjct: 343 ILKFLKQKYVKNSKLE 358


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,938
Number of Sequences: 438
Number of extensions: 3376
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)