Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22k09
(709 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009107-1|AAH09107.1| 879|Homo sapiens microtubule associated ... 35 0.25
AL160291-7|CAI16908.1| 878|Homo sapiens novel protein kinase do... 35 0.25
AL160291-6|CAI16909.1| 879|Homo sapiens novel protein kinase do... 35 0.25
AL160291-5|CAI16910.1| 840|Homo sapiens novel protein kinase do... 35 0.25
AK074804-1|BAC11218.1| 840|Homo sapiens protein ( Homo sapiens ... 35 0.25
AK027719-1|BAB55321.1| 878|Homo sapiens protein ( Homo sapiens ... 35 0.25
BC148207-1|AAI48208.1| 395|Homo sapiens Unknown (protein for IM... 33 1.0
BC069197-1|AAH69197.1| 643|Homo sapiens autocrine motility fact... 33 1.0
BC056869-1|AAH56869.1| 202|Homo sapiens AMFR protein protein. 33 1.0
BC017043-1|AAH17043.1| 292|Homo sapiens AMFR protein protein. 33 1.0
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 31 3.1
AF124145-1|AAD56722.1| 643|Homo sapiens autocrine motility fact... 31 3.1
DQ013876-1|AAY26238.1| 432|Homo sapiens cAMP regulatory element... 31 4.0
AK001925-1|BAA91981.1| 432|Homo sapiens protein ( Homo sapiens ... 31 4.0
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 31 4.0
AB034205-1|BAA90542.1| 432|Homo sapiens cisplatin resistance-as... 31 4.0
X85137-1|CAA59449.1| 1057|Homo sapiens kinesin-related protein p... 31 5.3
U79304-1|AAB50228.1| 372|Homo sapiens unknown protein. 31 5.3
U37426-1|AAA86132.1| 1056|Homo sapiens kinesin-like spindle prot... 31 5.3
BC126211-1|AAI26212.1| 1056|Homo sapiens kinesin family member 1... 31 5.3
BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein. 31 5.3
BC036453-1|AAH36453.1| 585|Homo sapiens family with sequence si... 31 5.3
AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular... 31 5.3
AL360222-1|CAH72288.1| 1056|Homo sapiens kinesin family member 1... 31 5.3
AL359564-1|CAB94869.1| 529|Homo sapiens hypothetical protein pr... 31 5.3
AL356128-3|CAI13671.1| 1056|Homo sapiens kinesin family member 1... 31 5.3
AL355474-3|CAI15710.1| 599|Homo sapiens family with sequence si... 31 5.3
AL355474-2|CAI15709.1| 607|Homo sapiens family with sequence si... 31 5.3
AL355474-1|CAI15708.1| 372|Homo sapiens family with sequence si... 31 5.3
AK026954-1|BAB15600.1| 628|Homo sapiens protein ( Homo sapiens ... 31 5.3
AF387761-1|AAK71311.1| 148|Homo sapiens TCR beta chain Vbeta13S... 31 5.3
AF352051-1|AAL05625.1| 1616|Homo sapiens proliferation potential... 31 5.3
AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding ... 31 5.3
AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding ... 31 5.3
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 30 7.1
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 30 7.1
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 30 7.1
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 30 7.1
AJ405661-1|CAC03774.1| 75|Homo sapiens T-cell receptor beta ch... 30 7.1
AF161918-1|AAD47675.1| 339|Homo sapiens C-C chemokine receptor ... 30 7.1
AF011529-1|AAB65729.1| 352|Homo sapiens CCR5 receptor protein. 30 7.1
AF011524-1|AAB65724.1| 352|Homo sapiens CCR5 receptor protein. 30 7.1
L34059-1|AAA35627.1| 916|Homo sapiens cadherin-4 protein. 30 9.3
BC113387-1|AAI13388.1| 248|Homo sapiens family with sequence si... 30 9.3
BC113385-1|AAI13386.1| 248|Homo sapiens family with sequence si... 30 9.3
AL513550-4|CAI17194.1| 805|Homo sapiens RP11-98I9.2 protein. 30 9.3
AL009173-2|CAI42611.1| 248|Homo sapiens novel protein protein. 30 9.3
AK094978-1|BAC04467.1| 248|Homo sapiens protein ( Homo sapiens ... 30 9.3
AF314185-1|AAL76164.1| 283|Homo sapiens SR rich protein protein. 30 9.3
AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein. 30 9.3
AF011503-1|AAB65703.1| 352|Homo sapiens CCR5 receptor protein. 30 9.3
>BC009107-1|AAH09107.1| 879|Homo sapiens microtubule associated
serine/threonine kinase-like protein.
Length = 879
Score = 35.1 bits (77), Expect = 0.25
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 381 DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDR 518
DK QTP K+ I+ +CE DE +K +S L SD+DR
Sbjct: 515 DKQQTPEKLPIPMIAKNLMCELDEDCEKNSKRDYLSSSFLCSDDDR 560
>AL160291-7|CAI16908.1| 878|Homo sapiens novel protein kinase
domain containing protein protein.
Length = 878
Score = 35.1 bits (77), Expect = 0.25
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 381 DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDR 518
DK QTP K+ I+ +CE DE +K +S L SD+DR
Sbjct: 515 DKQQTPEKLPIPMIAKNLMCELDEDCEKNSKRDYLSSSFLCSDDDR 560
>AL160291-6|CAI16909.1| 879|Homo sapiens novel protein kinase
domain containing protein protein.
Length = 879
Score = 35.1 bits (77), Expect = 0.25
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 381 DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDR 518
DK QTP K+ I+ +CE DE +K +S L SD+DR
Sbjct: 515 DKQQTPEKLPIPMIAKNLMCELDEDCEKNSKRDYLSSSFLCSDDDR 560
>AL160291-5|CAI16910.1| 840|Homo sapiens novel protein kinase
domain containing protein protein.
Length = 840
Score = 35.1 bits (77), Expect = 0.25
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 381 DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDR 518
DK QTP K+ I+ +CE DE +K +S L SD+DR
Sbjct: 515 DKQQTPEKLPIPMIAKNLMCELDEDCEKNSKRDYLSSSFLCSDDDR 560
>AK074804-1|BAC11218.1| 840|Homo sapiens protein ( Homo sapiens
cDNA FLJ90323 fis, clone NT2RP2001769, weakly similar to
SERINE/THREONINE-PROTEIN KINASE ORB6 (EC 2.7.1.-). ).
Length = 840
Score = 35.1 bits (77), Expect = 0.25
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 381 DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDR 518
DK QTP K+ I+ +CE DE +K +S L SD+DR
Sbjct: 515 DKQQTPEKLPIPMIAKNLMCELDEDCEKNSKRDYLSSSFLCSDDDR 560
>AK027719-1|BAB55321.1| 878|Homo sapiens protein ( Homo sapiens
cDNA FLJ14813 fis, clone NT2RP4002408, moderately
similar to PROTEIN KINASE CEK1 (EC 2.7.1.-). ).
Length = 878
Score = 35.1 bits (77), Expect = 0.25
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 381 DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDR 518
DK QTP K+ I+ +CE DE +K +S L SD+DR
Sbjct: 515 DKQQTPEKLPIPMIAKNLMCELDEDCEKNSKRDYLSSSFLCSDDDR 560
>BC148207-1|AAI48208.1| 395|Homo sapiens Unknown (protein for
IMAGE:40112974) protein.
Length = 395
Score = 33.1 bits (72), Expect = 1.0
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 159 KKIIDKYNRDDAVQTKYLPDRGDSSDK-REKSRILDLAERKRIRERYT 299
K+ ++K + DDA +LP G SSD + R+L A +R++++ T
Sbjct: 347 KRFLNKSSEDDAASESFLPSEGASSDPVTLRRRMLAAAAERRLQKQQT 394
>BC069197-1|AAH69197.1| 643|Homo sapiens autocrine motility factor
receptor protein.
Length = 643
Score = 33.1 bits (72), Expect = 1.0
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 159 KKIIDKYNRDDAVQTKYLPDRGDSSDK-REKSRILDLAERKRIRERYT 299
K+ ++K + DDA +LP G SSD + R+L A +R++++ T
Sbjct: 595 KRFLNKSSEDDAASESFLPSEGASSDPVTLRRRMLAAAAERRLQKQQT 642
>BC056869-1|AAH56869.1| 202|Homo sapiens AMFR protein protein.
Length = 202
Score = 33.1 bits (72), Expect = 1.0
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 159 KKIIDKYNRDDAVQTKYLPDRGDSSDK-REKSRILDLAERKRIRERYT 299
K+ ++K + DDA +LP G SSD + R+L A +R++++ T
Sbjct: 154 KRFLNKSSEDDAASESFLPSEGASSDPVTLRRRMLAAAAERRLQKQQT 201
>BC017043-1|AAH17043.1| 292|Homo sapiens AMFR protein protein.
Length = 292
Score = 33.1 bits (72), Expect = 1.0
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 159 KKIIDKYNRDDAVQTKYLPDRGDSSDK-REKSRILDLAERKRIRERYT 299
K+ ++K + DDA +LP G SSD + R+L A +R++++ T
Sbjct: 244 KRFLNKSSEDDAASESFLPSEGASSDPVTLRRRMLAAAAERRLQKQQT 291
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 31.5 bits (68), Expect = 3.1
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 2/147 (1%)
Frame = +3
Query: 219 RGDSSDKREKSRILDLAERKRIRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQT 395
R S DKR+ + R R R R + R + ++ GS EDT + +S++
Sbjct: 347 RSKSKDKRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRS 406
Query: 396 PSK-IDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGS 572
PS+ + E AK ++ S ++GR S N+ TR + KP S
Sbjct: 407 PSRSVSKEREHAK----SESSQREGRG-----ESENAGRNEETR-SRSRSNSKSKPNLPS 456
Query: 573 IQIDLTSRAKKTSKYTETERREAKRPP 653
+ A KT +++ R A R P
Sbjct: 457 ESRSRSKSASKTRSRSKSRSRSASRSP 483
>AF124145-1|AAD56722.1| 643|Homo sapiens autocrine motility factor
receptor protein.
Length = 643
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 159 KKIIDKYNRDDAVQTKYLPDRGDSSDK-REKSRILDLAERKRIRERYT 299
K+ ++K + DDA +LP G SSD + R+L A +R++++ T
Sbjct: 595 KRFLNKSSEDDAASESFLPLEGASSDPVTLRRRMLAAAAERRLQKQQT 642
>DQ013876-1|AAY26238.1| 432|Homo sapiens cAMP regulatory element
associated protein 1 protein.
Length = 432
Score = 31.1 bits (67), Expect = 4.0
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 1/162 (0%)
Frame = +3
Query: 219 RGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCE-DTTKDKSQT 395
R ++REK R D RKR R R + +D+ + S K + E ++ + +
Sbjct: 272 RRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRR 331
Query: 396 PSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSI 575
S+ S D K R K + D ++ R K +K S+
Sbjct: 332 RSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSV 391
Query: 576 QIDLTSRAKKTSKYTETERREAKRPPEIASGVDKKPDIKNSG 701
+ + +K S+ T TE +E+ E+ +G + DIK+ G
Sbjct: 392 K---SGSREKQSEDTNTESKESDTKNEV-NGTSE--DIKSEG 427
>AK001925-1|BAA91981.1| 432|Homo sapiens protein ( Homo sapiens
cDNA FLJ11063 fis, clone PLACE1004814, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 432
Score = 31.1 bits (67), Expect = 4.0
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 1/162 (0%)
Frame = +3
Query: 219 RGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCE-DTTKDKSQT 395
R ++REK R D RKR R R + +D+ + S K + E ++ + +
Sbjct: 272 RRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRR 331
Query: 396 PSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSI 575
S+ S D K R K + D ++ R K +K S+
Sbjct: 332 RSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSV 391
Query: 576 QIDLTSRAKKTSKYTETERREAKRPPEIASGVDKKPDIKNSG 701
+ + +K S+ T TE +E+ E+ +G + DIK+ G
Sbjct: 392 K---SGSREKQSEDTNTESKESDTKNEV-NGTSE--DIKSEG 427
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 31.1 bits (67), Expect = 4.0
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 2/147 (1%)
Frame = +3
Query: 219 RGDSSDKREKSRILDLAERKRIRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQT 395
R S DKR+ + R R R R + R + ++ GS EDT + +S++
Sbjct: 272 RSKSKDKRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRS 331
Query: 396 PSK-IDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGS 572
PS+ + E AK ++ S ++GR S N TR + KP S
Sbjct: 332 PSRSVSKEREHAK----SESSQREGRG-----ESENAGTNQETR-SRSRSNSKSKPNLPS 381
Query: 573 IQIDLTSRAKKTSKYTETERREAKRPP 653
+ A KT +++ R A R P
Sbjct: 382 ESRSRSKSASKTRSRSKSRSRSASRSP 408
>AB034205-1|BAA90542.1| 432|Homo sapiens cisplatin
resistance-associated overexpressed protein protein.
Length = 432
Score = 31.1 bits (67), Expect = 4.0
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 1/162 (0%)
Frame = +3
Query: 219 RGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCE-DTTKDKSQT 395
R ++REK R D RKR R R + +D+ + S K + E ++ + +
Sbjct: 272 RRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRR 331
Query: 396 PSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSI 575
S+ S D K R K + D ++ R K +K S+
Sbjct: 332 RSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSV 391
Query: 576 QIDLTSRAKKTSKYTETERREAKRPPEIASGVDKKPDIKNSG 701
+ + +K S+ T TE +E+ E+ +G + DIK+ G
Sbjct: 392 K---SGSREKQSEDTNTESKESDTKNEV-NGTSE--DIKSEG 427
>X85137-1|CAA59449.1| 1057|Homo sapiens kinesin-related protein
protein.
Length = 1057
Score = 30.7 bits (66), Expect = 5.3
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 282 IRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID 410
++E Y T L++ ++ ++ + SK ++T E+TTKD S SK+D
Sbjct: 476 VKEEYITSALESTEEKLHDAA-SKLLNTVEETTKDVSGLHSKLD 518
>U79304-1|AAB50228.1| 372|Homo sapiens unknown protein.
Length = 372
Score = 30.7 bits (66), Expect = 5.3
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 123 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRIL-DLAE-RKRIRERY 296
T T+ + K+ I K+ + KY P GD + E + + DLA+ RK+++E
Sbjct: 199 TITQLTKHIQSLKRKIRKFEEKFEQEKKYRPSHGDKTSNPEVLKWMNDLAKGRKQLKE-- 256
Query: 297 TIRLKAADQNVNTSVGSKTISTCEDTT 377
++LK +++ + G CE T
Sbjct: 257 -LKLKLSEEQGSAPKGPPRNLLCEQPT 282
>U37426-1|AAA86132.1| 1056|Homo sapiens kinesin-like spindle protein
HKSP protein.
Length = 1056
Score = 30.7 bits (66), Expect = 5.3
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 282 IRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID 410
++E Y T L++ ++ ++ + SK ++T E+TTKD S SK+D
Sbjct: 476 VKEEYITSALESTEEKLHDAA-SKLLNTVEETTKDVSGLHSKLD 518
>BC126211-1|AAI26212.1| 1056|Homo sapiens kinesin family member 11
protein.
Length = 1056
Score = 30.7 bits (66), Expect = 5.3
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 282 IRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID 410
++E Y T L++ ++ ++ + SK ++T E+TTKD S SK+D
Sbjct: 476 VKEEYITSALESTEEKLHDAA-SKLLNTVEETTKDVSGLHSKLD 518
>BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein.
Length = 919
Score = 30.7 bits (66), Expect = 5.3
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 3/206 (1%)
Frame = +3
Query: 75 FNTYINHLIDMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSR 254
F ++H I ++K S+E G TK +RD +V K P++ +S + EK
Sbjct: 536 FTKDVSHEIIQHEVKSSKNSASSEKGKTK------DRDYSVLEKENPEKRKNSTQPEKES 589
Query: 255 ILDLAERKRIRERYTIR-LKAADQNVNTSVGSKTISTCEDTTKDKSQT-PSKIDTESISA 428
LD R+ E+ + L + + TS K ST + KD + K D ++
Sbjct: 590 NLD-----RLNEQGNFKSLSQSSKEARTS--DKHDSTRASSNKDFTPNRDKKTDYDTREY 642
Query: 429 KGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLT-SRAKK 605
DE + R P + + + + + R + +K S + + + SR +K
Sbjct: 643 SSSKRRDEKNELTRRKDSPSRNKDSASGQKNKP-REERDLPKKGTGDSKKSNSSPSRDRK 701
Query: 606 TSKYTETERREAKRPPEIASGVDKKP 683
+ T + KRP E VDK P
Sbjct: 702 PHDHKATY--DTKRPNEETKSVDKNP 725
>BC036453-1|AAH36453.1| 585|Homo sapiens family with sequence
similarity 13, member C1 protein.
Length = 585
Score = 30.7 bits (66), Expect = 5.3
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 123 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRIL-DLAE-RKRIRERY 296
T T+ + K+ I K+ + KY P GD + E + + DLA+ RK+++E
Sbjct: 285 TITQLTKHIQSLKRKIRKFEEKFEQEKKYRPSHGDKTSNPEVLKWMNDLAKGRKQLKE-- 342
Query: 297 TIRLKAADQNVNTSVGSKTISTCEDTT 377
++LK +++ + G CE T
Sbjct: 343 -LKLKLSEEQGSAPKGPPRNLLCEQPT 368
>AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular
protein PACT protein.
Length = 1625
Score = 30.7 bits (66), Expect = 5.3
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 3/206 (1%)
Frame = +3
Query: 75 FNTYINHLIDMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSR 254
F ++H I ++K S+E G TK +RD +V K P++ +S + EK
Sbjct: 1209 FTKDVSHEIIQHEVKSSKNSASSEKGKTK------DRDYSVLEKENPEKRKNSTQPEKES 1262
Query: 255 ILDLAERKRIRERYTIR-LKAADQNVNTSVGSKTISTCEDTTKDKSQT-PSKIDTESISA 428
LD R+ E+ + L + + TS K ST + KD + K D ++
Sbjct: 1263 NLD-----RLNEQGNFKSLSQSSKEARTS--DKHDSTRASSNKDFTPNRDKKTDYDTREY 1315
Query: 429 KGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLT-SRAKK 605
DE + R P + + + + + R + +K S + + + SR +K
Sbjct: 1316 SSSKRRDEKNELTRRKDSPSRNKDSASGQKNKP-REERDLPKKGTGDSKKSNSSPSRDRK 1374
Query: 606 TSKYTETERREAKRPPEIASGVDKKP 683
+ T + KRP E VDK P
Sbjct: 1375 PHDHKATY--DTKRPNEETKSVDKNP 1398
>AL360222-1|CAH72288.1| 1056|Homo sapiens kinesin family member 11
protein.
Length = 1056
Score = 30.7 bits (66), Expect = 5.3
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 282 IRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID 410
++E Y T L++ ++ ++ + SK ++T E+TTKD S SK+D
Sbjct: 476 VKEEYITSALESTEEKLHDAA-SKLLNTVEETTKDVSGLHSKLD 518
>AL359564-1|CAB94869.1| 529|Homo sapiens hypothetical protein
protein.
Length = 529
Score = 30.7 bits (66), Expect = 5.3
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 3/206 (1%)
Frame = +3
Query: 75 FNTYINHLIDMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSR 254
F ++H I ++K S+E G TK +RD +V K P++ +S + EK
Sbjct: 113 FTKDVSHEIIQHEVKSSKNSASSEKGKTK------DRDYSVLEKENPEKRKNSTQPEKES 166
Query: 255 ILDLAERKRIRERYTIR-LKAADQNVNTSVGSKTISTCEDTTKDKSQT-PSKIDTESISA 428
LD R+ E+ + L + + TS K ST + KD + K D ++
Sbjct: 167 NLD-----RLNEQGNFKSLSQSSKEARTS--DKHDSTRASSNKDFTPNRDKKTDYDTREY 219
Query: 429 KGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLT-SRAKK 605
DE + R P + + + + + R + +K S + + + SR +K
Sbjct: 220 SSSKRRDEKNELTRRKDSPSRNKDSASGQKNKP-REERDLPKKGTGDSKKSNSSPSRDRK 278
Query: 606 TSKYTETERREAKRPPEIASGVDKKP 683
+ T + KRP E VDK P
Sbjct: 279 PHDHKATY--DTKRPNEETKSVDKNP 302
>AL356128-3|CAI13671.1| 1056|Homo sapiens kinesin family member 11
protein.
Length = 1056
Score = 30.7 bits (66), Expect = 5.3
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 282 IRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID 410
++E Y T L++ ++ ++ + SK ++T E+TTKD S SK+D
Sbjct: 476 VKEEYITSALESTEEKLHDAA-SKLLNTVEETTKDVSGLHSKLD 518
>AL355474-3|CAI15710.1| 599|Homo sapiens family with sequence
similarity 13, member C1 protein.
Length = 599
Score = 30.7 bits (66), Expect = 5.3
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 123 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRIL-DLAE-RKRIRERY 296
T T+ + K+ I K+ + KY P GD + E + + DLA+ RK+++E
Sbjct: 299 TITQLTKHIQSLKRKIRKFEEKFEQEKKYRPSHGDKTSNPEVLKWMNDLAKGRKQLKE-- 356
Query: 297 TIRLKAADQNVNTSVGSKTISTCEDTT 377
++LK +++ + G CE T
Sbjct: 357 -LKLKLSEEQGSAPKGPPRNLLCEQPT 382
>AL355474-2|CAI15709.1| 607|Homo sapiens family with sequence
similarity 13, member C1 protein.
Length = 607
Score = 30.7 bits (66), Expect = 5.3
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 123 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRIL-DLAE-RKRIRERY 296
T T+ + K+ I K+ + KY P GD + E + + DLA+ RK+++E
Sbjct: 307 TITQLTKHIQSLKRKIRKFEEKFEQEKKYRPSHGDKTSNPEVLKWMNDLAKGRKQLKE-- 364
Query: 297 TIRLKAADQNVNTSVGSKTISTCEDTT 377
++LK +++ + G CE T
Sbjct: 365 -LKLKLSEEQGSAPKGPPRNLLCEQPT 390
>AL355474-1|CAI15708.1| 372|Homo sapiens family with sequence
similarity 13, member C1 protein.
Length = 372
Score = 30.7 bits (66), Expect = 5.3
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 123 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRIL-DLAE-RKRIRERY 296
T T+ + K+ I K+ + KY P GD + E + + DLA+ RK+++E
Sbjct: 199 TITQLTKHIQSLKRKIRKFEEKFEQEKKYRPSHGDKTSNPEVLKWMNDLAKGRKQLKE-- 256
Query: 297 TIRLKAADQNVNTSVGSKTISTCEDTT 377
++LK +++ + G CE T
Sbjct: 257 -LKLKLSEEQGSAPKGPPRNLLCEQPT 282
>AK026954-1|BAB15600.1| 628|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23301 fis, clone HEP11120. ).
Length = 628
Score = 30.7 bits (66), Expect = 5.3
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 3/206 (1%)
Frame = +3
Query: 75 FNTYINHLIDMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSR 254
F ++H I ++K S+E G TK +RD +V K P++ +S + EK
Sbjct: 212 FTKDVSHEIIQHEVKSSKNSASSEKGKTK------DRDYSVLEKENPEKRKNSTQPEKES 265
Query: 255 ILDLAERKRIRERYTIR-LKAADQNVNTSVGSKTISTCEDTTKDKSQT-PSKIDTESISA 428
LD R+ E+ + L + + TS K ST + KD + K D ++
Sbjct: 266 NLD-----RLNEQGNFKSLSQSSKEARTS--DKHDSTRASSNKDFTPNRDKKTDYDTREY 318
Query: 429 KGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLT-SRAKK 605
DE + R P + + + + + R + +K S + + + SR +K
Sbjct: 319 SSSKRRDEKNELTRRKDSPSRNKDSASGQKNKP-REERDLPKKGTGDSKKSNSSPSRDRK 377
Query: 606 TSKYTETERREAKRPPEIASGVDKKP 683
+ T + KRP E VDK P
Sbjct: 378 PHDHKATY--DTKRPNEETKSVDKNP 401
>AF387761-1|AAK71311.1| 148|Homo sapiens TCR beta chain
Vbeta13S2A1T-KPTSASSYEQYF-Jbeta2.7 protein.
Length = 148
Score = 30.7 bits (66), Expect = 5.3
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2
Query: 542 VHQSETAKGQYPDRFDVT--SEEDV*VHGDRAAGSETTARDCVRRR*KAGYKEQWQP 706
V + TAKG+ PD ++V+ +++ + + AA S+T+ C + A Y++ + P
Sbjct: 61 VGEGTTAKGEVPDGYNVSRLKKQNFLLGSESAAPSQTSVYFCASKPTSASYEQYFGP 117
>AF352051-1|AAL05625.1| 1616|Homo sapiens proliferation
potential-related protein protein.
Length = 1616
Score = 30.7 bits (66), Expect = 5.3
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 3/206 (1%)
Frame = +3
Query: 75 FNTYINHLIDMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSR 254
F ++H I ++K S+E G TK +RD +V K P++ +S + EK
Sbjct: 1200 FTKDVSHEIIQHEVKSSKNSASSEKGKTK------DRDYSVLEKENPEKRKNSTQPEKES 1253
Query: 255 ILDLAERKRIRERYTIR-LKAADQNVNTSVGSKTISTCEDTTKDKSQT-PSKIDTESISA 428
LD R+ E+ + L + + TS K ST + KD + K D ++
Sbjct: 1254 NLD-----RLNEQGNFKSLSQSSKEARTS--DKHDSTRASSNKDFTPNRDKKTDYDTREY 1306
Query: 429 KGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLT-SRAKK 605
DE + R P + + + + + R + +K S + + + SR +K
Sbjct: 1307 SSSKRRDEKNELTRRKDSPSRNKDSASGQKNKP-REERDLPKKGTGDSKKSNSSPSRDRK 1365
Query: 606 TSKYTETERREAKRPPEIASGVDKKP 683
+ T + KRP E VDK P
Sbjct: 1366 PHDHKATY--DTKRPNEETKSVDKNP 1389
>AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding
protein 6 isoform 2 protein.
Length = 1758
Score = 30.7 bits (66), Expect = 5.3
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 3/206 (1%)
Frame = +3
Query: 75 FNTYINHLIDMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSR 254
F ++H I ++K S+E G TK +RD +V K P++ +S + EK
Sbjct: 1342 FTKDVSHEIIQHEVKSSKNSASSEKGKTK------DRDYSVLEKENPEKRKNSTQPEKES 1395
Query: 255 ILDLAERKRIRERYTIR-LKAADQNVNTSVGSKTISTCEDTTKDKSQT-PSKIDTESISA 428
LD R+ E+ + L + + TS K ST + KD + K D ++
Sbjct: 1396 NLD-----RLNEQGNFKSLSQSSKEARTS--DKHDSTRASSNKDFTPNRDKKTDYDTREY 1448
Query: 429 KGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLT-SRAKK 605
DE + R P + + + + + R + +K S + + + SR +K
Sbjct: 1449 SSSKRRDEKNELTRRKDSPSRNKDSASGQKNKP-REERDLPKKGTGDSKKSNSSPSRDRK 1507
Query: 606 TSKYTETERREAKRPPEIASGVDKKP 683
+ T + KRP E VDK P
Sbjct: 1508 PHDHKATY--DTKRPNEETKSVDKNP 1531
>AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding
protein 6 isoform 1 protein.
Length = 1792
Score = 30.7 bits (66), Expect = 5.3
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 3/206 (1%)
Frame = +3
Query: 75 FNTYINHLIDMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSR 254
F ++H I ++K S+E G TK +RD +V K P++ +S + EK
Sbjct: 1376 FTKDVSHEIIQHEVKSSKNSASSEKGKTK------DRDYSVLEKENPEKRKNSTQPEKES 1429
Query: 255 ILDLAERKRIRERYTIR-LKAADQNVNTSVGSKTISTCEDTTKDKSQT-PSKIDTESISA 428
LD R+ E+ + L + + TS K ST + KD + K D ++
Sbjct: 1430 NLD-----RLNEQGNFKSLSQSSKEARTS--DKHDSTRASSNKDFTPNRDKKTDYDTREY 1482
Query: 429 KGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLT-SRAKK 605
DE + R P + + + + + R + +K S + + + SR +K
Sbjct: 1483 SSSKRRDEKNELTRRKDSPSRNKDSASGQKNKP-REERDLPKKGTGDSKKSNSSPSRDRK 1541
Query: 606 TSKYTETERREAKRPPEIASGVDKKP 683
+ T + KRP E VDK P
Sbjct: 1542 PHDHKATY--DTKRPNEETKSVDKNP 1565
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 7.1
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 2/147 (1%)
Frame = +3
Query: 219 RGDSSDKREKSRILDLAERKRIRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQT 395
R S DKR+ + R R R R + R + ++ GS EDT + +S++
Sbjct: 347 RSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRS 406
Query: 396 PSK-IDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGS 572
PS+ + E AK ++ S ++GR S N TR + KP S
Sbjct: 407 PSRSVSKEREHAK----SESSQREGRG-----ESENAGTNQETR-SRSRSNSKSKPNLPS 456
Query: 573 IQIDLTSRAKKTSKYTETERREAKRPP 653
+ A KT +++ R A R P
Sbjct: 457 ESRSRSKSASKTRSRSKSRSRSASRSP 483
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 7.1
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 2/147 (1%)
Frame = +3
Query: 219 RGDSSDKREKSRILDLAERKRIRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQT 395
R S DKR+ + R R R R + R + ++ GS EDT + +S++
Sbjct: 347 RSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRS 406
Query: 396 PSK-IDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGS 572
PS+ + E AK ++ S ++GR S N TR + KP S
Sbjct: 407 PSRSVSKEREHAK----SESSQREGRG-----ESENAGTNQETR-SRSRSNSKSKPNLPS 456
Query: 573 IQIDLTSRAKKTSKYTETERREAKRPP 653
+ A KT +++ R A R P
Sbjct: 457 ESRSRSKSASKTRSRSKSRSRSASRSP 483
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 7.1
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 2/147 (1%)
Frame = +3
Query: 219 RGDSSDKREKSRILDLAERKRIRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQT 395
R S DKR+ + R R R R + R + ++ GS EDT + +S++
Sbjct: 347 RSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRS 406
Query: 396 PSK-IDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGS 572
PS+ + E AK ++ S ++GR S N TR + KP S
Sbjct: 407 PSRSVSKEREHAK----SESSQREGRG-----ESENAGTNQETR-SRSRSNSKSKPNLPS 456
Query: 573 IQIDLTSRAKKTSKYTETERREAKRPP 653
+ A KT +++ R A R P
Sbjct: 457 ESRSRSKSASKTRSRSKSRSRSASRSP 483
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 7.1
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 2/147 (1%)
Frame = +3
Query: 219 RGDSSDKREKSRILDLAERKRIRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQT 395
R S DKR+ + R R R R + R + ++ GS EDT + +S++
Sbjct: 347 RSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRS 406
Query: 396 PSK-IDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGS 572
PS+ + E AK ++ S ++GR S N TR + KP S
Sbjct: 407 PSRSVSKEREHAK----SESSQREGRG-----ESENAGTNQETR-SRSRSNSKSKPNLPS 456
Query: 573 IQIDLTSRAKKTSKYTETERREAKRPP 653
+ A KT +++ R A R P
Sbjct: 457 ESRSRSKSASKTRSRSKSRSRSASRSP 483
>AJ405661-1|CAC03774.1| 75|Homo sapiens T-cell receptor beta chain
protein.
Length = 75
Score = 30.3 bits (65), Expect = 7.1
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 542 VHQSETAKGQYPDRFDVT--SEEDV*VHGDRAAGSETTARDCVRRR*KAGYKEQW 700
V + TAKG+ PD ++V+ +++ + + AA S+T+ C R A Y EQ+
Sbjct: 19 VGEGTTAKGEVPDGYNVSRLKKQNFLLGLESAAPSQTSVYFCASRALVATYNEQF 73
>AF161918-1|AAD47675.1| 339|Homo sapiens C-C chemokine receptor 5
protein.
Length = 339
Score = 30.3 bits (65), Expect = 7.1
Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Frame = -1
Query: 700 PLFFISGFLSTP-DAISGGRFASRRSVSVYLDVF---FARDVKSIWILPFCGFRLMNLTT 533
P++ I+ + S P I+ + A+R + +Y VF F ++ I IL C RL ++T
Sbjct: 1 PIYDINYYTSEPCQKINVKQIAARLLLPLYSLVFIFGFVGNMLVILILINCK-RLKSMTD 59
Query: 532 LYILVRSLSDISVLVIGTLTDLPFFIDSSFSQSPFAEIDSVSILLGVWLLSF 377
+Y+L ++SD+ L+ +PF+ + +Q F +L G++ + F
Sbjct: 60 IYLLNLAISDLFFLL-----TVPFWAHYAAAQWDFGN-TMCQLLTGLYFIGF 105
>AF011529-1|AAB65729.1| 352|Homo sapiens CCR5 receptor protein.
Length = 352
Score = 30.3 bits (65), Expect = 7.1
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Frame = -1
Query: 700 PLFFISGFLSTP-DAISGGRFASRRSVSVYLDVF---FARDVKSIWILPFCGFRLMNLTT 533
P++ I+ + S P I+ + A+R +Y VF F ++ I IL C RL ++T
Sbjct: 8 PIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINCK-RLKSMTD 66
Query: 532 LYILVRSLSDISVLVIGTLTDLPFFIDSSFSQSPFAEIDSVSILLGVWLLSFVVSSQVDI 353
+Y+L ++SD+ L+ +PF+ + +Q F +L G++ + F I
Sbjct: 67 IYLLNLAISDLFFLL-----TVPFWAHYAAAQWDFGN-TMCQLLTGLYFIGFFSGIFFII 120
Query: 352 VLDPTLVLTFWSAAFNLM-------VYLSLMRFLSARSKILDFSLLSDESPRSGKYFVCT 194
+L L A F L V S++ ++ A S L ++ S + G ++ C+
Sbjct: 121 LLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVSASLP-GIIFTRSQKEGLHYTCS 179
Query: 193 A 191
+
Sbjct: 180 S 180
>AF011524-1|AAB65724.1| 352|Homo sapiens CCR5 receptor protein.
Length = 352
Score = 30.3 bits (65), Expect = 7.1
Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Frame = -1
Query: 700 PLFFISGFLSTP-DAISGGRFASRRSVSVYLDVF---FARDVKSIWILPFCGFRLMNLTT 533
P++ I+ + S P I+ + A+R + +Y VF F ++ I IL C RL ++T
Sbjct: 8 PIYDINYYTSEPCQKINVKQIAARLLLPLYSLVFIFGFVGNMLVILILINCK-RLKSMTD 66
Query: 532 LYILVRSLSDISVLVIGTLTDLPFFIDSSFSQSPFAEIDSVSILLGVWLLSF 377
+Y+L ++SD+ L+ +PF+ + +Q F +L G++ + F
Sbjct: 67 IYLLNLAISDLFFLL-----TVPFWAHYAAAQWDFGN-TMCQLLTGLYFIGF 112
>L34059-1|AAA35627.1| 916|Homo sapiens cadherin-4 protein.
Length = 916
Score = 29.9 bits (64), Expect = 9.3
Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 5/128 (3%)
Frame = +3
Query: 78 NTYINHLIDMSTRNNT--KTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKS 251
N N +D ++ T T +N++ D+ QT P + + E
Sbjct: 279 NQVYNCSVDEGSKPGTYVMTITANDADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETG 338
Query: 252 RILDLA---ERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESI 422
I+ +A +R+++++ YT+ ++A D N + G +T T D + PS+ T S
Sbjct: 339 DIVTVAAGWDREKVQQ-YTVIVQATDMEGNLNYGLSNTATAIITVTDVNDNPSEF-TAST 396
Query: 423 SAKGLCEN 446
A + EN
Sbjct: 397 FAGEVPEN 404
>BC113387-1|AAI13388.1| 248|Homo sapiens family with sequence
similarity 133, member A protein.
Length = 248
Score = 29.9 bits (64), Expect = 9.3
Identities = 22/106 (20%), Positives = 45/106 (42%)
Frame = +3
Query: 114 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRER 293
++ K NES K+ K + + ++ DSS S + + KR +++
Sbjct: 75 KSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKK 134
Query: 294 YTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAK 431
K++ + + S S++ + + K K +T + D S+S K
Sbjct: 135 KNRSYKSSQSSTHES-ESESKESVKKKKKSKDETEKEKDVRSLSKK 179
>BC113385-1|AAI13386.1| 248|Homo sapiens family with sequence
similarity 133, member A protein.
Length = 248
Score = 29.9 bits (64), Expect = 9.3
Identities = 22/106 (20%), Positives = 45/106 (42%)
Frame = +3
Query: 114 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRER 293
++ K NES K+ K + + ++ DSS S + + KR +++
Sbjct: 75 KSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKK 134
Query: 294 YTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAK 431
K++ + + S S++ + + K K +T + D S+S K
Sbjct: 135 KNRSYKSSQSSTHES-ESESKESVKKKKKSKDETEKEKDVRSLSKK 179
>AL513550-4|CAI17194.1| 805|Homo sapiens RP11-98I9.2 protein.
Length = 805
Score = 29.9 bits (64), Expect = 9.3
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Frame = +3
Query: 108 STRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIR 287
S T + S D +KI D+ K+ + + K+E+SR +D +K+ +
Sbjct: 623 SRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDK 682
Query: 288 ERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID-TESISAKGLCENDESIKK 464
ER + K ++ K S+ +D K K ++ + SIS K + + K
Sbjct: 683 EREREQDKRKEKQKREEKDFK-FSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSK 741
Query: 465 GRSVK 479
+ K
Sbjct: 742 KSTTK 746
>AL009173-2|CAI42611.1| 248|Homo sapiens novel protein protein.
Length = 248
Score = 29.9 bits (64), Expect = 9.3
Identities = 22/106 (20%), Positives = 45/106 (42%)
Frame = +3
Query: 114 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRER 293
++ K NES K+ K + + ++ DSS S + + KR +++
Sbjct: 75 KSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKK 134
Query: 294 YTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAK 431
K++ + + S S++ + + K K +T + D S+S K
Sbjct: 135 KNRSYKSSQSSTHES-ESESKESVKKKKKSKDETEKEKDVRSLSKK 179
>AK094978-1|BAC04467.1| 248|Homo sapiens protein ( Homo sapiens
cDNA FLJ37659 fis, clone BRHIP2010610, weakly similar to
GAR2 PROTEIN. ).
Length = 248
Score = 29.9 bits (64), Expect = 9.3
Identities = 22/106 (20%), Positives = 45/106 (42%)
Frame = +3
Query: 114 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRER 293
++ K NES K+ K + + ++ DSS S + + KR +++
Sbjct: 75 KSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKK 134
Query: 294 YTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAK 431
K++ + + S S++ + + K K +T + D S+S K
Sbjct: 135 KNRSYKSSQSSTHES-ESESKESVKKKKKSKDETEKEKDVRSLSKK 179
>AF314185-1|AAL76164.1| 283|Homo sapiens SR rich protein protein.
Length = 283
Score = 29.9 bits (64), Expect = 9.3
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Frame = +3
Query: 108 STRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIR 287
S T + S D +KI D+ K+ + + K+E+SR +D +K+ +
Sbjct: 101 SRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDK 160
Query: 288 ERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID-TESISAKGLCENDESIKK 464
ER + K ++ K S+ +D K K ++ + SIS K + + K
Sbjct: 161 EREREQDKRKEKQKREEKDFK-FSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSK 219
Query: 465 GRSVK 479
+ K
Sbjct: 220 KSTTK 224
>AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein.
Length = 805
Score = 29.9 bits (64), Expect = 9.3
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Frame = +3
Query: 108 STRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIR 287
S T + S D +KI D+ K+ + + K+E+SR +D +K+ +
Sbjct: 623 SRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDK 682
Query: 288 ERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID-TESISAKGLCENDESIKK 464
ER + K ++ K S+ +D K K ++ + SIS K + + K
Sbjct: 683 EREREQDKRKEKQKREEKDFK-FSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSK 741
Query: 465 GRSVK 479
+ K
Sbjct: 742 KSTTK 746
>AF011503-1|AAB65703.1| 352|Homo sapiens CCR5 receptor protein.
Length = 352
Score = 29.9 bits (64), Expect = 9.3
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Frame = -1
Query: 700 PLFFISGFLSTP-DAISGGRFASRRSVSVYLDVF---FARDVKSIWILPFCGFRLMNLTT 533
P++ I+ + S P I+ + A+R +Y VF F ++ I IL C RL ++T
Sbjct: 8 PIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINCK-RLKSMTD 66
Query: 532 LYILVRSLSDISVLVIGTLTDLPFFIDSSFSQSPFAEIDSVSILLGVWLLSF 377
+Y+L ++SD+ L+ +PF+ + +Q F E +L G++ + F
Sbjct: 67 IYLLNLAISDLFFLL-----TVPFWAHYAAAQWDF-ENTMCQLLTGLYFIGF 112
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,397,933
Number of Sequences: 237096
Number of extensions: 1501859
Number of successful extensions: 4700
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 4494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4700
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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